RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PACSIN2Q9UNF0 486 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 CAPN6Q9Y6Q1 641 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 F8VP50 259 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 FTCDO95954 541 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 GPC5P78333 572 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 FAM102AQ5T9C2 384 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 DNAJC24Q6P3W2 148 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 TRIM72Q6ZMU5 477 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 DAAM2Q86T65 1068 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 MYCBPAPQ8TBZ2 947 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 C18orf8Q96DM3 657 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 ACBD6Q9BR61 282 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 KIAA1257Q9ULG3 409 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 SYNJ2BP-COX16A0A087WUM0 186 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 GOLGA6L9A6NEM1 432 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 ADAM12O43184 909 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 UNGP13051 313 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-212ENST00000523483 ARHGAP25P42331 645 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 CACNA2D1P54289 1103 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 BCAT1P54687 386 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 DDR2Q16832 855 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 DAB2IPQ5VWQ8 1189 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 LCLAT1Q6UWP7 414 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 PIGZQ86VD9 579 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 MCOLN2Q8IZK6 566 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 SIX6OS1Q8N1H7 587 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 CRYBG2Q8N1P7 616 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 SLC39A11Q8N1S5 342 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 WDTC1Q8N5D0 677 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 TTC9BQ8N6N2 239 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 EMC1Q8N766 993 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 MSANTD4Q8NCY6 345 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 FAXDC2Q96IV6 333 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 MCEEQ96PE7 176 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 TSGA10Q9BZW7 698 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 RRAGDQ9NQL2 400 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-212ENST00000523483 COX16Q9P0S2 106 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 ANAPC7Q9UJX3 599 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 CHD9Q3L8U1 2897 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-212ENST00000523483 SYN3O14994 580 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 GZMAP12544 262 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 NPR3P17342 541 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 GPD2P43304 727 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 ADIGQ0VDE8 80 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 BST2Q10589 180 aaKnown RBP9.87□□□□□ -0.83
SDCBP-212ENST00000523483 DUSP4Q13115 394 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 LLGL1Q15334 1064 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 PLPP4Q5VZY2 271 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 RSPO2Q6UXX9 243 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-212ENST00000523483 ALS2CR12Q96Q35 445 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 WDR24Q96S15 920 aa9.87□□□□□ -0.83
SDCBP-212ENST00000523483 MAGED2Q9UNF1 606 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-212ENST00000523483 TMEM189-UBE2V1I3L0A0 370 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CYP1A1P04798 512 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 TYMPP19971 482 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 GLUD2P49448 558 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CENPCQ03188 943 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ADCY1Q08828 1119 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CDO1Q16878 200 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ANKS3Q6ZW76 656 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 DCP1BQ8IZD4 617 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ANKRD52Q8NB46 1076 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 FBXO22Q8NEZ5 403 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 OLIG1Q8TAK6 271 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ZNF564Q8TBZ8 553 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ARNTL2Q8WYA1 636 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 SELENOOQ9BVL4 669 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 VN1R3Q9BXE9 311 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 PALMO75781 387 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ARHGEF15O94989 841 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ERBB2P04626 1255 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 PPM1AP35813 382 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 GPR15P49685 360 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 NDUFV1P49821 464 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 STILQ15468 1287 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 C10orf76Q5T2E6 689 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 C4orf50Q6ZRC1 276 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CLEC4CQ8WTT0 213 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 RFFLQ8WZ73 363 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 PIWIL1Q96J94 861 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 TCF25Q9BQ70 676 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 MRPL17Q9NRX2 175 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 LINC01553A4QN01 128 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 NCK2O43639 380 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 LCA5LO95447 670 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 LSM8O95777 96 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CYP11A1P05108 521 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 TMEM253P0C7T8 217 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ANXA13P27216 316 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 RPL7AP62424 266 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 TAF5Q15542 800 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 TAF12Q16514 161 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CLEC20AQ6ZU45 233 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms