RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 KRBA1A5PL33 1030 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 SOBPA7XYQ1 873 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 TRIM66O15016 1216 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 NPR3P17342 541 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 AVPR2P30518 371 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 CLCN5P51795 746 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 NDST1P52848 882 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 STX17P56962 302 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 CYP4F8P98187 520 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 PFKPQ01813 784 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 INCA1Q0VD86 236 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 CBWD6Q4V339 395 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 CBWD3Q5JTY5 395 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 CBWD5Q5RIA9 395 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 VITQ6UXI7 678 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 ACOT1Q86TX2 421 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 GBP4Q96PP9 640 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 SLC46A2Q9BY10 475 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 ZNF518BQ9C0D4 1074 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 CA14Q9ULX7 337 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 ZNF638Q14966 1978 aaKnown RBP17.44■□□□□ 0.38
PABPC1-221ENST00000522720 OBSL1O75147 1896 aa17.44■□□□□ 0.38
PABPC1-221ENST00000522720 F5P12259 2224 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 HEPACAM2A8MVW5 462 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 F8VP50 259 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 CLDN5O00501 218 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 PSMC3P17980 439 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 ANXA13P27216 316 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 VCPP55072 806 aaKnown RBP17.43■□□□□ 0.38
PABPC1-221ENST00000522720 PAQR9Q6ZVX9 377 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 MFSD6LQ8IWD5 586 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 FLCNQ8NFG4 579 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 DEPDC1BQ8WUY9 529 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 TRMT61BQ9BVS5 477 aaKnown RBP17.43■□□□□ 0.38
PABPC1-221ENST00000522720 ARHGEF3Q9NR81 526 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 TMEM30AQ9NV96 361 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 ARIH1Q9Y4X5 557 aaPredicted RBP17.43■□□□□ 0.38
PABPC1-221ENST00000522720 NUP210Q8TEM1 1887 aaPredicted RBP17.43■□□□□ 0.38
PABPC1-221ENST00000522720 ATP8B3O60423 1300 aa17.43■□□□□ 0.38
PABPC1-221ENST00000522720 KMT2EQ8IZD2 1858 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 PMM2O15305 246 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 GNA14O95837 355 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 DDX6P26196 483 aaKnown RBP eCLIP17.42■□□□□ 0.386e-38■□□□□ 11.3
PABPC1-221ENST00000522720 CACNA2D1P54289 1103 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 GRM2Q14416 872 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 CCDC40Q4G0X9 1142 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 SLC44A4Q53GD3 710 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 WDR44Q5JSH3 913 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 IER5LQ5T953 404 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 ASTLQ6HA08 431 aaPredicted RBP17.42■□□□□ 0.38
PABPC1-221ENST00000522720 DENND5BQ6ZUT9 1274 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 MON1AQ86VX9 555 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 FUKQ8N0W3 1084 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 MRPS31Q92665 395 aaKnown RBP17.42■□□□□ 0.38
PABPC1-221ENST00000522720 RSPRY1Q96DX4 576 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 TTLL2Q9BWV7 592 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 SRRTQ9BXP5 876 aaKnown RBP17.42■□□□□ 0.38
PABPC1-221ENST00000522720 KCNH6Q9H252 994 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 OBP2AQ9NY56 170 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 EHD2Q9NZN4 543 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 HMGXB4Q9UGU5 601 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 RWDD2AQ9UIY3 292 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 ANAPC1Q9H1A4 1944 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 MYH10P35580 1976 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 NCANO14594 1321 aa17.42■□□□□ 0.38
PABPC1-221ENST00000522720 CILPO75339 1184 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 TADA3O75528 432 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 FGFR1OPO95684 399 aaKnown RBP17.41■□□□□ 0.38
PABPC1-221ENST00000522720 FMO5P49326 533 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 MARSP56192 900 aaKnown RBP17.41■□□□□ 0.38
PABPC1-221ENST00000522720 ORC1Q13415 861 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 CWF19L1Q69YN2 538 aaKnown RBP17.41■□□□□ 0.38
PABPC1-221ENST00000522720 TXNDC8Q6A555 127 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 PHLDB3Q6NSJ2 640 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 FAM35AQ86V20 835 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 GPIHBP1Q8IV16 184 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 CMTM8Q8IZV2 173 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 MLKLQ8NB16 471 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 WHAMMQ8TF30 809 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 IRF7Q92985 503 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 TATDN2Q93075 761 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 SHDQ96IW2 340 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 TWNKQ96RR1 684 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 MED10Q9BTT4 135 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 NT5C1AQ9BXI3 368 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 NUP62CLQ9H1M0 184 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 FAM124BQ9H5Z6 455 aaPredicted RBP17.41■□□□□ 0.38
PABPC1-221ENST00000522720 BRD9Q9H8M2 597 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 TRPV5Q9NQA5 729 aa17.41■□□□□ 0.38
PABPC1-221ENST00000522720 DPYSL4O14531 572 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 PRAMEF12O95522 483 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 CD58P19256 250 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 TRIM21P19474 475 aaKnown RBP17.4■□□□□ 0.38
PABPC1-221ENST00000522720 AOC1P19801 751 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 GDI1P31150 447 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 STARD6P59095 220 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 USP46P62068 366 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 FCHO2Q0JRZ9 810 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 MLF2Q15773 248 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-221ENST00000522720 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms