RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CHST13Q8NET6 341 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 C15orf41Q9Y2V0 281 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CDY2AQ9Y6F7 541 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CDY1Q9Y6F8 540 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 PYGMP11217 842 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CAP2P40123 477 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 MCL1Q07820 350 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 PBXIP1Q96AQ6 731 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 POP1Q99575 1024 aaKnown RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 EGFL8Q99944 293 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 HACD3Q9P035 362 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 HEY2Q9UBP5 337 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CD4P01730 458 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 MYL2P10916 166 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 PTK6Q13882 451 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CBWD6Q4V339 395 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CBWD3Q5JTY5 395 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CBWD5Q5RIA9 395 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 C2orf69Q8N8R5 385 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 RMDN1Q96DB5 314 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CCDC90BQ9GZT6 254 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 AURKCQ9UQB9 309 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 ANGPT2O15123 496 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 ADCY3O60266 1144 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CYP3A4P08684 503 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CNGA2Q16280 664 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CRELD2Q6UXH1 353 aaPredicted RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 LRRC57Q8N9N7 239 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 MAP3K20Q9NYL2 800 aaKnown RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 TMX2Q9Y320 296 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 ADAMTS3O15072 1205 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 RARAP10276 462 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 QPCTQ16769 361 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 DCAF6Q58WW2 860 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 EFHC1Q5JVL4 640 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 GRAMD4Q6IC98 578 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 SLC5A5Q92911 643 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 C20orf96Q9NUD7 363 aaPredicted RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 GAS2O43903 313 aaKnown RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 DAB2IPQ5VWQ8 1189 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 FBXO36Q8NEA4 188 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ART4Q93070 314 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 MRGBPQ9NV56 204 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ERAP1Q9NZ08 941 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 RGPD5Q99666 1765 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 LRP6O75581 1613 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 KIF13AQ9H1H9 1805 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 DDTLA6NHG4 134 aaPredicted RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 GH1P01241 217 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 KCNA2P16389 499 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 VHLP40337 213 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 RECQLP46063 649 aaPredicted RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 FAXCQ5TGI0 409 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 C16orf89Q6UX73 402 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 C4orf19Q8IY42 314 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 SNX19Q92543 992 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ZNF669Q96BR6 464 aaPredicted RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ZNF518BQ9C0D4 1074 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ELP3Q9H9T3 547 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ENO4A6NNW6 628 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 SLITRK3O94933 977 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 ITGB3P05106 788 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 HADHAP40939 763 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 MMP13P45452 471 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 RHBDL3P58872 404 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 KCNT1Q5JUK3 1230 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 C16orf87Q6PH81 154 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 SLC30A9Q6PML9 568 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 MAGEC3Q8TD91 643 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 EME1Q96AY2 570 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 TSPAN17Q96FV3 270 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 DEFB129Q9H1M3 183 aa14.37□□□□□ -0.11
SYNPO-205ENST00000522122 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 STX18Q9P2W9 335 aaKnown RBP14.37□□□□□ -0.11
SYNPO-205ENST00000522122 FLT3P36888 993 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 NAMPTP43490 491 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
SYNPO-205ENST00000522122 ARHGEF38Q9NXL2 777 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 NSMCE4AQ9NXX6 385 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 NINJ2Q9NZG7 142 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 MCM8Q9UJA3 840 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 MTSS1O43312 755 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 CYP24A1Q07973 514 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 AUHQ13825 339 aaKnown RBP14.36□□□□□ -0.11
SYNPO-205ENST00000522122 INPP5AQ14642 412 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 GRIK5Q16478 980 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms