RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 DMWDQ09019 674 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 TDGQ13569 410 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 ASPRV1Q53RT3 343 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 ATAT1Q5SQI0 421 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 PLPP4Q5VZY2 271 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 XRRA1Q6P2D8 792 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 SYCE2Q6PIF2 218 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 PAQR3Q6TCH7 311 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 RPTNQ6XPR3 784 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 STOX1Q6ZVD7 989 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 USP53Q70EK8 1073 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 OTOP3Q7RTS5 596 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 CABP7Q86V35 215 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 GIMAP8Q8ND71 665 aaPredicted RBP6.98□□□□□ -1.29
CCDC6-203ENST00000518638 PLEKHO2Q8TD55 490 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 THAP3Q8WTV1 239 aaPredicted RBP6.98□□□□□ -1.29
CCDC6-203ENST00000518638 MRPS27Q92552 414 aaKnown RBP6.98□□□□□ -1.29
CCDC6-203ENST00000518638 RTKNQ9BST9 563 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 GPR27Q9NS67 375 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 MARCH2Q9P0N8 246 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 COL20A1Q9P218 1284 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 PCDHB7Q9Y5E2 793 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 CDY2AQ9Y6F7 541 aa6.98□□□□□ -1.29
CCDC6-203ENST00000518638 FNDC1Q4ZHG4 1894 aaPredicted RBP6.98□□□□□ -1.29
CCDC6-203ENST00000518638 TPRP12270 2363 aaKnown RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 RRN3P2A6NIE6 340 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 FIBPO43427 364 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 AKAP8O43823 692 aaKnown RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 DHX16O60231 1041 aaKnown RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 FUCA1P04066 466 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 MAPKAPK2P49137 400 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 SARSP49591 514 aaKnown RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 PPFIA1Q13136 1202 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 GIT2Q14161 759 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 SMC1AQ14683 1233 aaKnown RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 PGM5Q15124 567 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 C2orf27AQ580R0 203 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 DENND4AQ7Z401 1863 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 COLGALT1Q8NBJ5 622 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 NETO2Q8NC67 525 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 CHAMP1Q96JM3 812 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 EXOC2Q96KP1 924 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 SENP7Q9BQF6 1050 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 AMNQ9BXJ7 453 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 RNF41Q9H4P4 317 aaPredicted RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 ERAP1Q9NZ08 941 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 IGSF9Q9P2J2 1179 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 NCDNQ9UBB6 729 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 WNT16Q9UBV4 365 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 FBXL7Q9UJT9 491 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 DDX19BQ9UMR2 479 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 HCFC2Q9Y5Z7 792 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 KMT2BQ9UMN6 2715 aaPredicted RBP6.97□□□□□ -1.29
CCDC6-203ENST00000518638 ZMYM6O95789 1325 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 IGSF9BQ9UPX0 1349 aa6.97□□□□□ -1.29
CCDC6-203ENST00000518638 MBLAC1A4D2B0 266 aaPredicted RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 CLSTN1O94985 981 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ASGR2P07307 311 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 CD52P31358 61 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 VIPR1P32241 457 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 BCL6P41182 706 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ACAP1Q15027 740 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 QRICH1Q2TAL8 776 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ZNF528Q3MIS6 628 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 PLEKHN1Q494U1 663 aaPredicted RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 RRP12Q5JTH9 1297 aaKnown RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 FAM209AQ5JX71 171 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 RNF187Q5TA31 235 aaPredicted RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 WWC2Q6AWC2 1192 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 CCDC149Q6ZUS6 474 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 IQCA1Q86XH1 822 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 DGKHQ86XP1 1220 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 TEX2Q8IWB9 1127 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ADGRF4Q8IZF3 695 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 USP33Q8TEY7 942 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 DNAJB3Q8WWF6 145 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 RSPH1Q8WYR4 309 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 CDHR1Q96JP9 859 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 IPO9Q96P70 1041 aaKnown RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 INPP4AQ96PE3 977 aaPredicted RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ZFYVE21Q9BQ24 234 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 PHF20Q9BVI0 1012 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ELAC1Q9H777 363 aaKnown RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 ERVK-5Q9HDB9 667 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 KLHL42Q9P2K6 505 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 PADI3Q9ULW8 664 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 PCDHA2Q9Y5H9 948 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 PCDHA1Q9Y5I3 950 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 TRPV2Q9Y5S1 764 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 R4GN57 208 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 TTC41PQ6P2S7 1318 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 KDM3AQ9Y4C1 1321 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 EPG5Q9HCE0 2579 aa6.96□□□□□ -1.3
CCDC6-203ENST00000518638 EP300Q09472 2414 aaPredicted RBP6.96□□□□□ -1.3
CCDC6-203ENST00000518638 DMDP11532 3685 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 DNAH14Q0VDD8 3507 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms