RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZNF280BQ86YH2 543 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 SLC15A3Q8IY34 581 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 TXLNBQ8N3L3 684 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.39□□□□□ -1.55
SQLE-202ENST00000518604 ENAHQ8N8S7 591 aaPredicted RBP5.39□□□□□ -1.55
SQLE-202ENST00000518604 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 ZNF384Q8TF68 577 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 PPP2R3CQ969Q6 453 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 ZNF747Q9BV97 191 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 MAGEB5Q9BZ81 275 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 TRIM5Q9C035 493 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 VPS11Q9H270 941 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 DNMT3BQ9UBC3 853 aaKnown RBP5.39□□□□□ -1.55
SQLE-202ENST00000518604 TESQ9UGI8 421 aaKnown RBP5.39□□□□□ -1.55
SQLE-202ENST00000518604 RAB27BO00194 218 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 KCNQ3O43525 872 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 HARSP12081 509 aaKnown RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 EEF1GP26641 437 aaKnown RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 PPM1AP35813 382 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 PTDSS1P48651 473 aaKnown RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 HSPA7P48741 367 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 COPAP53621 1224 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 PRKAG1P54619 331 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 SLC35G1Q2M3R5 365 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ZNF750Q32MQ0 723 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ZIK1Q3SY52 487 aaPredicted RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 TEDDM1Q5T9Z0 273 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ARHGAP40Q5TG30 622 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 RGS7BPQ6MZT1 257 aaPredicted RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 VWA1Q6PCB0 445 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 C1orf228Q6PIY5 440 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 SYTL1Q8IYJ3 562 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 SPARTQ8N0X7 666 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 B3GALNT2Q8NCR0 500 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 SLC30A5Q8TAD4 765 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 CYP2W1Q8TAV3 490 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 SSH3Q8TE77 659 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ZNF566Q969W8 418 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 KIAA1191Q96A73 305 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 TMEM41AQ96HV5 264 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ZNF668Q96K58 619 aaPredicted RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 COQ10AQ96MF6 247 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 PSMD1Q99460 953 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ZNF341Q9BYN7 854 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 WDR11Q9BZH6 1224 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 TPSD1Q9BZJ3 242 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 WDR12Q9GZL7 423 aaKnown RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 ZCWPW1Q9H0M4 648 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 CXorf36Q9H7Y0 433 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 CASS4Q9NQ75 786 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 HEYLQ9NQ87 328 aaPredicted RBP5.38□□□□□ -1.55
SQLE-202ENST00000518604 TM7SF3Q9NS93 570 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 TBC1D23Q9NUY8 699 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 KCTD5Q9NXV2 234 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 ANKFY1Q9P2R3 1169 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 SSX2IPQ9Y2D8 614 aa5.38□□□□□ -1.55
SQLE-202ENST00000518604 H7C4K7 107 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 hCG_1984214I3L0E3 225 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ADAMTS3O15072 1205 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 NARSO43776 548 aaKnown RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 RRP9O43818 475 aaKnown RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 TLR5O60602 858 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 PLA2G6O60733 806 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 HKR1P10072 659 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ITGAMP11215 1152 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 PPP3CBP16298 524 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ABCB4P21439 1286 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 TGM1P22735 817 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 PRKAR1BP31321 381 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 MCM7P33993 719 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ZEB1P37275 1124 aaPredicted RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 TECP42680 631 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 AVPR1BP47901 424 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 PDE6CP51160 858 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 CCNIQ14094 377 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 PTPRRQ15256 657 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 SF3B3Q15393 1217 aaKnown RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 MPEG1Q2M385 716 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ZXDCQ2QGD7 858 aaPredicted RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 NBPF8Q3BBV2 869 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 CERCAMQ5T4B2 595 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 VPS53Q5VIR6 699 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 MYLK4Q86YV6 388 aaPredicted RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 LCORLQ8N3X6 602 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ASB10Q8WXI3 467 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 SNX27Q96L92 541 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 GDF15Q99988 308 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 MLST8Q9BVC4 326 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ALG8Q9BVK2 526 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 ACTRT3Q9BYD9 372 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 MAN2B2Q9Y2E5 1009 aa5.37□□□□□ -1.55
SQLE-202ENST00000518604 MRPS17Q9Y2R5 130 aaKnown RBP5.37□□□□□ -1.55
SQLE-202ENST00000518604 TPD52L2O43399 206 aaKnown RBP5.36□□□□□ -1.55
SQLE-202ENST00000518604 RGS10O43665 173 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 EIF3JO75822 258 aaKnown RBP5.36□□□□□ -1.55
SQLE-202ENST00000518604 PIAS2O75928 621 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 RASAL1O95294 804 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 CSF1RP07333 972 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 INSRRP14616 1297 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms