RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PRAMEF4O60810 478 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 TMEM127O75204 238 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 PRPF6O94906 941 aaKnown RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 PCDH8O95206 1070 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 WEE2P0C1S8 567 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF12P17014 697 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 ECHS1P30084 290 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 CRHR1P34998 444 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 PTPN7P35236 360 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 IARSP41252 1262 aaKnown RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 NPTX2P47972 431 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 EIF6P56537 245 aaKnown RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 GRSF1Q12849 480 aaKnown RBP eCLIP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 PEX6Q13608 980 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 NCAPHQ15003 741 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 KIF19Q2TAC6 998 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 SLC9C1Q4G0N8 1177 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 PITRM1Q5JRX3 1037 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 KIAA1841Q6NSI8 718 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF529Q6P280 563 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 CREB3L2Q70SY1 520 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 CDC20BQ86Y33 519 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 TRMT2AQ8IZ69 625 aaKnown RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 FAM9AQ8IZU1 332 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 LRRC8CQ8TDW0 803 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 ADAMTS18Q8TE60 1221 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 SNX33Q8WV41 574 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 ATRIPQ8WXE1 791 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 OSBP2Q969R2 916 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 IGSF21Q96ID5 467 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 WDR24Q96S15 920 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 CRBNQ96SW2 442 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 MYL10Q9BUA6 226 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF518BQ9C0D4 1074 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 PLEKHA4Q9H4M7 779 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 RBM12Q9NTZ6 932 aaKnown RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 GNEQ9Y223 722 aaKnown RBP-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 DLGAP4Q9Y2H0 992 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 MYPNQ86TC9 1320 aa-0.23□□□□□ -2.45
RNU6-542P-201ENST00000516405 SLC12A8A0AV02 714 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 KCNQ3O43525 872 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 APOL3O95236 402 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 IL6RP08887 468 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 CD48P09326 243 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 FCGR1AP12314 374 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 TIMP3P35625 211 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 CPA2P48052 419 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 SCNN1BP51168 640 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 DRG2P55039 364 aaKnown RBP-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 SEC61A1P61619 476 aaKnown RBP-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 STIM1Q13586 685 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 RNF212Q495C1 297 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 ANO7Q6IWH7 933 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 B4GALNT3Q6L9W6 998 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 SWSAP1Q6NVH7 229 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 ARHGAP11AQ6P4F7 1023 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 C9orf139Q6ZV77 190 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 MTDHQ86UE4 582 aaKnown RBP-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 ERC1Q8IUD2 1116 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 FAM217AQ8IXS0 508 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 SRBD1Q8N5C6 995 aaKnown RBP-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 FITM2Q8N6M3 262 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 CDYL2Q8N8U2 506 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 KLHL29Q96CT2 875 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 FOXN4Q96NZ1 517 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 LENG8Q96PV6 779 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 BRINP2Q9C0B6 783 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 HIF1ANQ9NWT6 349 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 GGT7Q9UJ14 662 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 NEU2Q9Y3R4 380 aa-0.24□□□□□ -2.45
RNU6-542P-201ENST00000516405 A0A0B4J269 797 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 A0A0G2JK05 382 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 RPS10-NUDT3A0A1W2PQS6 291 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 INAFM1C9JVW0 142 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 TOR1BO14657 336 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 GSTA4O15217 222 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 MAFGO15525 162 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 PRODHO43272 600 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 HIP1RO75146 1068 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 SORBS2O94875 1100 aaKnown RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 WDR47O94967 919 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 IGKV3-15P01624 115 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 NPSP0C0P6 89 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 RAP2AP10114 183 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 ATP5JP18859 108 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 NR1D1P20393 614 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 PTX3P26022 381 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 HSD17B4P51659 736 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 CLCN2P51788 898 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 YPEL5P62699 121 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 TUBB3Q13509 450 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 CNGA3Q16281 694 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 RNASE12Q5GAN4 147 aaKnown RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 FAM47CQ5HY64 1035 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 Q5PR19 223 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 GPR157Q5UAW9 335 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 MRM1Q6IN84 353 aaKnown RBP-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 ZNF793Q6ZN11 406 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 OVCH1Q7RTY7 1134 aa-0.25□□□□□ -2.45
RNU6-542P-201ENST00000516405 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms