RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 GZMAP12544 262 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 UNGP13051 313 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 RPA1P27694 616 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 L1CAMP32004 1257 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 STAT5BP51692 787 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 CLNS1AP54105 237 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 POU5F1BQ06416 359 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 CPNE8Q86YQ8 564 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 GORASP1Q9BQQ3 440 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 FAM192AQ9GZU8 254 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 THAP2Q9H0W7 228 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 KIAA1586Q9HCI6 787 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PDGFCQ9NRA1 345 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 NINJ2Q9NZG7 142 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PRKAG2Q9UGJ0 569 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 GBF1Q92538 1859 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 GSTTP1A0A1W2PQM5 241 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 C17orf102A2RUQ5 167 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 H3BRB1 525 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ATP5HO75947 161 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ARP10275 920 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 TCF7P36402 384 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 UBA7P41226 1012 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 QARSP47897 775 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 NUMBP49757 651 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 MNX1P50219 401 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 NEK3P51956 506 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 PLCB3Q01970 1234 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 KLHL30Q0D2K2 578 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 AP1B1Q10567 949 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ITGA7Q13683 1181 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 LY6KQ17RY6 165 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 FAM26DQ5JW98 314 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 PRAMEF19Q5SWL8 479 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 KLHL7Q8IXQ5 586 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 DAW1Q8N136 415 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 C7orf31Q8N865 590 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 SAAL1Q96ER3 474 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 NR1H4Q96RI1 486 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 TBC1D10AQ9BXI6 508 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 FGFR1OP2Q9NVK5 253 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 STX18Q9P2W9 335 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 GTF2IRD1Q9UHL9 959 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 SMIM35A0A1B0GVV1 85 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 TMEM120BA0PK00 339 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 H0YCG3 227 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 DLDP09622 509 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 PABPC4LP0CB38 370 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 HPDP32754 393 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 CASP4P49662 377 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 CCDC38Q502W7 563 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 FAM26FQ5R3K3 315 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 CATSPER3Q86XQ3 398 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 UCMAQ8WVF2 138 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 KIFAP3Q92845 792 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 APBB2Q92870 758 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 NACC1Q96RE7 527 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 C16orf70Q9BSU1 422 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 MTIF3Q9H2K0 278 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 SCINQ9Y6U3 715 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 MBLAC1A4D2B0 266 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 F8W8V4 182 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 CD4P01730 458 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 PSMC6P62333 389 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 MSLNQ13421 630 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ZC2HC1CQ53FD0 456 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 TEX44Q53QW1 395 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 KRT79Q5XKE5 535 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 NT5DC4Q86YG4 428 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 SLC13A5Q86YT5 568 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 STON2Q8WXE9 905 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 RSRC1Q96IZ7 334 aaKnown RBP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ZWILCHQ9H900 591 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ALPK3Q96L96 1907 aa7.8□□□□□ -1.16
CLIP1-205ENST00000514271 ENO4A6NNW6 628 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 P4HA2O15460 535 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 EXOC3O60645 756 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 OATP04181 439 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 CLTBP09497 229 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 MAPTP10636 758 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 IMPDH2P12268 514 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 BMP8BP34820 402 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 RTP1P59025 263 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PDCD2Q16342 344 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 KHDC1Q4VXA5 237 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 TTC39BQ5VTQ0 682 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 RFWD3Q6PCD5 774 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 GJB7Q6PEY0 223 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 CHSY1Q86X52 802 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 STKLD1Q8NE28 680 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 CALML4Q96GE6 196 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 ELAC2Q9BQ52 826 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 C1orf21Q9H246 121 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 UTP11Q9Y3A2 253 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 ALG6Q9Y672 507 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms