RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 HSFY1Q96LI6 401 aa8.82□□□□□ -1
RNF4-220ENST00000513578 HNRNPABQ99729 332 aaKnown RBP8.82□□□□□ -1
RNF4-220ENST00000513578 ERP44Q9BS26 406 aa8.82□□□□□ -1
RNF4-220ENST00000513578 CNPY3Q9BT09 278 aa8.82□□□□□ -1
RNF4-220ENST00000513578 FRMD8P1Q9BZ68 369 aaPredicted RBP8.82□□□□□ -1
RNF4-220ENST00000513578 OSBPL8Q9BZF1 889 aa8.82□□□□□ -1
RNF4-220ENST00000513578 SNX25Q9H3E2 840 aa8.82□□□□□ -1
RNF4-220ENST00000513578 SYNCQ9H7C4 482 aa8.82□□□□□ -1
RNF4-220ENST00000513578 RGS18Q9NS28 235 aa8.82□□□□□ -1
RNF4-220ENST00000513578 ASNSD1Q9NWL6 643 aa8.82□□□□□ -1
RNF4-220ENST00000513578 HESX1Q9UBX0 185 aa8.82□□□□□ -1
RNF4-220ENST00000513578 AMACRQ9UHK6 382 aa8.82□□□□□ -1
RNF4-220ENST00000513578 FEZ2Q9UHY8 353 aaPredicted RBP8.82□□□□□ -1
RNF4-220ENST00000513578 NOD1Q9Y239 953 aa8.82□□□□□ -1
RNF4-220ENST00000513578 UTP11Q9Y3A2 253 aaKnown RBP8.82□□□□□ -1
RNF4-220ENST00000513578 PATJQ8NI35 1801 aa8.82□□□□□ -1
RNF4-220ENST00000513578 TANC1Q9C0D5 1861 aa8.81□□□□□ -1
RNF4-220ENST00000513578 A0A1W2PQ45 241 aaPredicted RBP8.81□□□□□ -1
RNF4-220ENST00000513578 A0A1W2PQY0 241 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ARHGEF37A1IGU5 675 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ARL5CA6NH57 179 aa8.81□□□□□ -1
RNF4-220ENST00000513578 C2CD4BA6NLJ0 364 aa8.81□□□□□ -1
RNF4-220ENST00000513578 F8VP50 259 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ARVCFO00192 962 aa8.81□□□□□ -1
RNF4-220ENST00000513578 CYB561D2O14569 222 aa8.81□□□□□ -1
RNF4-220ENST00000513578 TTI1O43156 1089 aa8.81□□□□□ -1
RNF4-220ENST00000513578 MGEA5O60502 916 aa8.81□□□□□ -1
RNF4-220ENST00000513578 LRCH4O75427 683 aa8.81□□□□□ -1
RNF4-220ENST00000513578 CYP11A1P05108 521 aa8.81□□□□□ -1
RNF4-220ENST00000513578 HSPA8P11142 646 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 CKBP12277 381 aa8.81□□□□□ -1
RNF4-220ENST00000513578 GPD1P21695 349 aa8.81□□□□□ -1
RNF4-220ENST00000513578 PSMA2P25787 234 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ECHS1P30084 290 aa8.81□□□□□ -1
RNF4-220ENST00000513578 HSPA9P38646 679 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 LHX1P48742 406 aa8.81□□□□□ -1
RNF4-220ENST00000513578 BCAT1P54687 386 aa8.81□□□□□ -1
RNF4-220ENST00000513578 FAM193AP78312 1265 aa8.81□□□□□ -1
RNF4-220ENST00000513578 SLC6A3Q01959 620 aa8.81□□□□□ -1
RNF4-220ENST00000513578 SLC25A11Q02978 314 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 GRIK3Q13003 919 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ORC1Q13415 861 aa8.81□□□□□ -1
RNF4-220ENST00000513578 SMC1AQ14683 1233 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 ZNF618Q5T7W0 954 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ALS2CLQ60I27 953 aa8.81□□□□□ -1
RNF4-220ENST00000513578 CCDC137Q6PK04 289 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 OSTM1Q86WC4 334 aa8.81□□□□□ -1
RNF4-220ENST00000513578 VSIG1Q86XK7 387 aa8.81□□□□□ -1
RNF4-220ENST00000513578 JAMLQ86YT9 394 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ADGRF2Q8IZF7 708 aa8.81□□□□□ -1
RNF4-220ENST00000513578 C12orf29Q8N999 325 aa8.81□□□□□ -1
RNF4-220ENST00000513578 CMASQ8NFW8 434 aaPredicted RBP8.81□□□□□ -1
RNF4-220ENST00000513578 JOSD2Q8TAC2 188 aa8.81□□□□□ -1
RNF4-220ENST00000513578 UBA3Q8TBC4 463 aa8.81□□□□□ -1
RNF4-220ENST00000513578 GRK7Q8WTQ7 553 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ZNF296Q8WUU4 475 aaPredicted RBP8.81□□□□□ -1
RNF4-220ENST00000513578 KCTD13Q8WZ19 329 aa8.81□□□□□ -1
RNF4-220ENST00000513578 ZFP42Q96MM3 310 aa8.81□□□□□ -1
RNF4-220ENST00000513578 SLITRK1Q96PX8 696 aa8.81□□□□□ -1
RNF4-220ENST00000513578 GAD1Q99259 594 aa8.81□□□□□ -1
RNF4-220ENST00000513578 FTHL17Q9BXU8 183 aa8.81□□□□□ -1
RNF4-220ENST00000513578 RSAD1Q9HA92 442 aa8.81□□□□□ -1
RNF4-220ENST00000513578 MED4Q9NPJ6 270 aa8.81□□□□□ -1
RNF4-220ENST00000513578 METTL5Q9NRN9 209 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 TRMT13Q9NUP7 481 aaKnown RBP8.81□□□□□ -1
RNF4-220ENST00000513578 MIOSQ9NXC5 875 aa8.81□□□□□ -1
RNF4-220ENST00000513578 HPCAL4Q9UM19 191 aa8.81□□□□□ -1
RNF4-220ENST00000513578 NFU1Q9UMS0 254 aa8.81□□□□□ -1
RNF4-220ENST00000513578 COL4A4P53420 1690 aaPredicted RBP8.81□□□□□ -1
RNF4-220ENST00000513578 NLRC5Q86WI3 1866 aa8.81□□□□□ -1
RNF4-220ENST00000513578 TCRBV7S2A1N4TA0A589 114 aa8.8□□□□□ -1
RNF4-220ENST00000513578 FAM170AA1A519 330 aa8.8□□□□□ -1
RNF4-220ENST00000513578 ZSCAN5CA6NGD5 496 aaPredicted RBP8.8□□□□□ -1
RNF4-220ENST00000513578 ZNF487B1APH4 448 aa8.8□□□□□ -1
RNF4-220ENST00000513578 C9IYK1 514 aa8.8□□□□□ -1
RNF4-220ENST00000513578 E5RJQ4 531 aa8.8□□□□□ -1
RNF4-220ENST00000513578 GOLGA8SH3BPF8 625 aa8.8□□□□□ -1
RNF4-220ENST00000513578 M0QZQ0 153 aa8.8□□□□□ -1
RNF4-220ENST00000513578 DNM1LO00429 736 aa8.8□□□□□ -1
RNF4-220ENST00000513578 XPO1O14980 1071 aaKnown RBP8.8□□□□□ -1
RNF4-220ENST00000513578 RNF8O76064 485 aa8.8□□□□□ -1
RNF4-220ENST00000513578 ENDOD1O94919 500 aa8.8□□□□□ -1
RNF4-220ENST00000513578 TJP3O95049 919 aa8.8□□□□□ -1
RNF4-220ENST00000513578 GJB6O95452 261 aa8.8□□□□□ -1
RNF4-220ENST00000513578 GHRP10912 638 aa8.8□□□□□ -1
RNF4-220ENST00000513578 LMO2P25791 158 aa8.8□□□□□ -1
RNF4-220ENST00000513578 MLH1P40692 756 aa8.8□□□□□ -1
RNF4-220ENST00000513578 PTPN9P43378 593 aa8.8□□□□□ -1
RNF4-220ENST00000513578 MRPS25P82663 173 aaKnown RBP8.8□□□□□ -1
RNF4-220ENST00000513578 PLCB3Q01970 1234 aa8.8□□□□□ -1
RNF4-220ENST00000513578 LMNB2Q03252 620 aa8.8□□□□□ -1
RNF4-220ENST00000513578 PDE4CQ08493 712 aa8.8□□□□□ -1
RNF4-220ENST00000513578 TUSC3Q13454 348 aa8.8□□□□□ -1
RNF4-220ENST00000513578 UPP1Q16831 310 aa8.8□□□□□ -1
RNF4-220ENST00000513578 PMF1Q6P1K2 205 aa8.8□□□□□ -1
RNF4-220ENST00000513578 TTC27Q6P3X3 843 aa8.8□□□□□ -1
RNF4-220ENST00000513578 OLFML1Q6UWY5 402 aa8.8□□□□□ -1
RNF4-220ENST00000513578 SPOCD1Q6ZMY3 1216 aa8.8□□□□□ -1
RNF4-220ENST00000513578 FAM183BPQ6ZVS7 135 aa8.8□□□□□ -1
RNF4-220ENST00000513578 SND1Q7KZF4 910 aaKnown RBP eCLIP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms