RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 TPH2Q8IWU9 490 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 SLC15A4Q8N697 577 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 DNAJC5GQ8N7S2 189 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 PNLDC1Q8NA58 520 aaKnown RBP2.92□□□□□ -1.94
PDGFC-208ENST00000512711 BRIX1Q8TDN6 353 aaKnown RBP2.92□□□□□ -1.94
PDGFC-208ENST00000512711 TBC1D5Q92609 795 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 C1GALT1C1Q96EU7 318 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 RITA1Q96K30 269 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 LRGUKQ96M69 825 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 MAP3K14Q99558 947 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 MESP1Q9BRJ9 268 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 THAP7Q9BT49 309 aaPredicted RBP2.92□□□□□ -1.94
PDGFC-208ENST00000512711 FSD1LQ9BXM9 530 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 RHOBTB2Q9BYZ6 727 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 GLOD4Q9HC38 313 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 PDGFCQ9NRA1 345 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.92□□□□□ -1.94
PDGFC-208ENST00000512711 ADAMTS5Q9UNA0 930 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 PLEKHM1Q9Y4G2 1056 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 ZNF521Q96K83 1311 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 TCRBV5S1A1TA0A578 114 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 KCNU1A8MYU2 1149 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 MYO1FO00160 1098 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 AP4M1O00189 453 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 EXOC3O60645 756 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 DTNBO60941 627 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 MOSPD3O75425 235 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 ONECUT2O95948 504 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 TOP3BO95985 862 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 TUBB4AP04350 444 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 KCNA3P22001 575 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 PPIFP30405 207 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 ARHGAP25P42331 645 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 RAB27AP51159 221 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 ALDH5A1P51649 535 aaPredicted RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 DGKEP52429 567 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 ARFIP2P53365 341 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 RAB1AP62820 205 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 DAZAP2Q15038 168 aaPredicted RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 CYP1B1Q16678 543 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 PTPROQ16827 1216 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 RNASE12Q5GAN4 147 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 IFIT1BQ5T764 474 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 L1TD1Q5T7N2 865 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 B3GNT9Q6UX72 402 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 DPY19L3Q6ZPD9 716 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 ABRAQ8N0Z2 381 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 C8orf58Q8NAV2 365 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 SLC35G2Q8TBE7 412 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 DIS3LQ8TF46 1054 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 TMEM171Q8WVE6 324 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 RPL36ALQ969Q0 106 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 PPP2R3CQ969Q6 453 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 RTFDC1Q9BY42 306 aaPredicted RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 GBA2Q9HCG7 927 aaPredicted RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 SARS2Q9NP81 518 aaKnown RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 GABBR1Q9UBS5 961 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 LPAR3Q9UBY5 353 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 CCNL1Q9UK58 526 aaPredicted RBP2.91□□□□□ -1.94
PDGFC-208ENST00000512711 STXBP5LQ9Y2K9 1186 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 MED16Q9Y2X0 877 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 TMX2Q9Y320 296 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 SNX14Q9Y5W7 946 aa2.91□□□□□ -1.94
PDGFC-208ENST00000512711 PROB1E7EW31 1015 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 BTN3A1O00481 513 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 OFD1O75665 1012 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ALDH1L1O75891 902 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 UBXN7O94888 489 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 KITP10721 976 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 NPR1P16066 1061 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 CERS1P27544 350 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 HTR1BP28222 390 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 VIPR2P41587 438 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 GPSM2P81274 684 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 MCL1Q07820 350 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 FGL2Q14314 439 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 RABEP1Q15276 862 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 PLA1AQ53H76 456 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 MORN5Q5VZ52 161 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 SLC9A4Q6AI14 798 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ZDHHC24Q6UX98 284 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 TRIM72Q6ZMU5 477 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 CAND1Q86VP6 1230 aaKnown RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 TERB1Q8NA31 727 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 RP9Q8TA86 221 aaKnown RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 JPH3Q8WXH2 748 aaPredicted RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 SOCS4Q8WXH5 440 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 RAPGEF4Q8WZA2 1011 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ASB2Q96Q27 587 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 NUP88Q99567 741 aaPredicted RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ACO2Q99798 780 aaKnown RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 PRSS22Q9GZN4 317 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ZMAT3Q9HA38 289 aaKnown RBP2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ATP6V0A4Q9HBG4 840 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 ANLNQ9NQW6 1124 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 GABRQQ9UN88 632 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 SH2B3Q9UQQ2 575 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 USP19O94966 1318 aa2.9□□□□□ -1.95
PDGFC-208ENST00000512711 A0A087WWL8 130 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms