RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 INTS8Q75QN2 995 aaKnown RBP14.17□□□□□ -0.14
RNF4-215ENST00000511843 ACOT1Q86TX2 421 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 CCDC105Q8IYK2 499 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 DTWD2Q8NBA8 298 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 B3GALNT2Q8NCR0 500 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 RIN3Q8TB24 985 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 DEPDC1BQ8WUY9 529 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 PRRX2Q99811 253 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 VRTNQ9H8Y1 702 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 APOBEC3GQ9HC16 384 aaKnown RBP14.17□□□□□ -0.14
RNF4-215ENST00000511843 TRPC7Q9HCX4 862 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 DLGAP2Q9P1A6 1054 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 CCL26Q9Y258 94 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 SIT1Q9Y3P8 196 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 CACNA1IQ9P0X4 2223 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 KANSL1LA0AUZ9 987 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 DPYSL4O14531 572 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 ZNF263O14978 683 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 BMP6P22004 513 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 ASPAP45381 313 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 SOX9P48436 509 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 PRKCQQ04759 706 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 IFRD2Q12894 506 aaPredicted RBP14.16□□□□□ -0.14
RNF4-215ENST00000511843 MAPRE1Q15691 268 aaKnown RBP14.16□□□□□ -0.14
RNF4-215ENST00000511843 SGSM1Q2NKQ1 1148 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 EDRF1Q3B7T1 1238 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 YAF2Q8IY57 180 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 ADSSL1Q8N142 457 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 TTC16Q8NEE8 873 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 SEMA4DQ92854 862 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 ATOH1Q92858 354 aaPredicted RBP14.16□□□□□ -0.14
RNF4-215ENST00000511843 SHDQ96IW2 340 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 SLC22A12Q96S37 553 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 CYP2S1Q96SQ9 504 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 DDX23Q9BUQ8 820 aaKnown RBP14.16□□□□□ -0.14
RNF4-215ENST00000511843 LTB4R2Q9NPC1 389 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 CHMP5Q9NZZ3 219 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 NDRG2Q9UN36 371 aaKnown RBP14.16□□□□□ -0.14
RNF4-215ENST00000511843 ATG2BQ96BY7 2078 aa14.16□□□□□ -0.14
RNF4-215ENST00000511843 C2orf78A6NCI8 922 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 FAM170BA6NMN3 283 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 ARNTLO00327 626 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 CETN3O15182 167 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 EPB41P11171 864 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 TARSP26639 723 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 NDST1P52848 882 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 TNK2Q07912 1038 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 FCHO2Q0JRZ9 810 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 ANGPT1Q15389 498 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 DCAF17Q5H9S7 520 aaPredicted RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 KLHL10Q6JEL2 608 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 VSTM1Q6UX27 236 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 ALYREFQ86V81 257 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 CMTM8Q8IZV2 173 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 MRPS31Q92665 395 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 DNASE1L2Q92874 299 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 IRF7Q92985 503 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 USP13Q92995 863 aaPredicted RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 TRMT2BQ96GJ1 504 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 KCNK16Q96T55 309 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 MED10Q9BTT4 135 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 FAM49BQ9NUQ9 324 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 HOOK1Q9UJC3 728 aaKnown RBP14.15□□□□□ -0.14
RNF4-215ENST00000511843 PIAS3Q9Y6X2 628 aa14.15□□□□□ -0.14
RNF4-215ENST00000511843 FANCMQ8IYD8 2048 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 FAM163BP0C2L3 166 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 CCDC130P13994 396 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 CD58P19256 250 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 ANXA13P27216 316 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 AVPR1AP37288 418 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 COBLL1Q53SF7 1204 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 PAQR9Q6ZVX9 377 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 FAM35AQ86V20 835 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 ARL14EPQ8N8R7 260 aaPredicted RBP14.14□□□□□ -0.15
RNF4-215ENST00000511843 BPIFB1Q8TDL5 484 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 E2F7Q96AV8 911 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 SPATA17Q96L03 361 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 MYRFLQ96LU7 910 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 TWNKQ96RR1 684 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 TSG101Q99816 390 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 BCO2Q9BYV7 579 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 ELOVL4Q9GZR5 314 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 TMEM8AQ9HCN3 771 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 GTSE1Q9NYZ3 720 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 F5P12259 2224 aa14.14□□□□□ -0.15
RNF4-215ENST00000511843 MYOFQ9NZM1 2061 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 TRIM66O15016 1216 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CHADO15335 359 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 P4HA1P13674 534 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CCNE1P24864 410 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 MRE11P49959 708 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 MXI1P50539 228 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 NUBP1P53384 320 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CAMK4Q16566 473 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CBWD6Q4V339 395 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CBWD3Q5JTY5 395 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CBWD5Q5RIA9 395 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms