RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CA14Q9ULX7 337 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 PTPRDP23468 1912 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 ECI2O75521 394 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 FGFR1OPO95684 399 aaKnown RBP14.86□□□□□ -0.03
DDX41-212ENST00000511040 FGF19O95750 216 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 F11P03951 625 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 ADORA2BP29275 332 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 CDC25CP30307 473 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 USP46P62068 366 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 INCA1Q0VD86 236 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 ZNF394Q53GI3 561 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 ARHGAP15Q53QZ3 475 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 PAQR9Q6ZVX9 377 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 FAM35AQ86V20 835 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 UNC93AQ86WB7 457 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 TRIM59Q8IWR1 403 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 FUKQ8N0W3 1084 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 SLC2A14Q8TDB8 520 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 WHAMMQ8TF30 809 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 RSPRY1Q96DX4 576 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 SMG9Q9H0W8 520 aaKnown RBP14.86□□□□□ -0.03
DDX41-212ENST00000511040 ZFP14Q9HCL3 533 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 KRT82Q9NSB4 513 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 COQ4Q9Y3A0 265 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 NCANO14594 1321 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 ATP8B3O60423 1300 aa14.86□□□□□ -0.03
DDX41-212ENST00000511040 TRIM66O15016 1216 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 CILPO75339 1184 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 TADA3O75528 432 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 GNA14O95837 355 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 KCNH2Q12809 1159 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 IFRD2Q12894 506 aaPredicted RBP14.85□□□□□ -0.03
DDX41-212ENST00000511040 TPD52L1Q16890 204 aaPredicted RBP14.85□□□□□ -0.03
DDX41-212ENST00000511040 IER5LQ5T953 404 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 TXNDC8Q6A555 127 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 ARID3BQ8IVW6 561 aaPredicted RBP14.85□□□□□ -0.03
DDX41-212ENST00000511040 SIX5Q8N196 739 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 CRYBG2Q8N1P7 616 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 ELSPBP1Q96BH3 223 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 SPATA17Q96L03 361 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 CNOT6LQ96LI5 555 aaKnown RBP14.85□□□□□ -0.03
DDX41-212ENST00000511040 C8orf48Q96LL4 319 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 KCNK16Q96T55 309 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 NT5C1AQ9BXI3 368 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 SLC46A2Q9BY10 475 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 GPR88Q9GZN0 384 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 TASP1Q9H6P5 420 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 CISHQ9NSE2 258 aa14.85□□□□□ -0.03
DDX41-212ENST00000511040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDX41-212ENST00000511040 HEPACAM2A8MVW5 462 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 AP1G2O75843 785 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 PRAMEF12O95522 483 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 AFPP02771 609 aaKnown RBP14.84□□□□□ -0.03
DDX41-212ENST00000511040 HSP90AA4PQ58FG1 418 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 VITQ6UXI7 678 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 DENND5BQ6ZUT9 1274 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 IRF2BP1Q8IU81 584 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 MAB21L3Q8N8X9 362 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 JAKMIP2Q96AA8 810 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 TRMT2BQ96GJ1 504 aaKnown RBP14.84□□□□□ -0.03
DDX41-212ENST00000511040 SMARCD1Q96GM5 515 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 MYRFLQ96LU7 910 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 MFSD1Q9H3U5 465 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 TRPC7Q9HCX4 862 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 SLC2A4RGQ9NR83 387 aa14.84□□□□□ -0.03
DDX41-212ENST00000511040 UXTQ9UBK9 157 aaPredicted RBP14.84□□□□□ -0.03
DDX41-212ENST00000511040 KRBA1A5PL33 1030 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 BEST1O76090 585 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 MBD3O95983 291 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
DDX41-212ENST00000511040 CUL2Q13617 745 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 BMP8AQ7Z5Y6 402 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 FLCNQ8NFG4 579 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 MRPS31Q92665 395 aaKnown RBP14.83□□□□□ -0.04
DDX41-212ENST00000511040 HEXIM2Q96MH2 286 aaKnown RBP14.83□□□□□ -0.04
DDX41-212ENST00000511040 NT5C1BQ96P26 610 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 LRRC3BQ96PB8 259 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 SMOQ99835 787 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 TRPV4Q9HBA0 871 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 DACH1Q9UI36 760 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 GREB1Q4ZG55 1949 aa14.83□□□□□ -0.04
DDX41-212ENST00000511040 OBSL1O75147 1896 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 COL4A3Q01955 1670 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 STK25O00506 426 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 DPYSL4O14531 572 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 ABL1P00519 1130 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 TRIM21P19474 475 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 COL9A1P20849 921 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 GDI1P31150 447 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 MTIF2P46199 727 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 RAD23BP54727 409 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 VCPP55072 806 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 MAP3K7CLP57077 242 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 CETN1Q12798 172 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 RBM43Q6ZSC3 357 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 MON1AQ86VX9 555 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 ARHGEF19Q8IW93 802 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 SUGP1Q8IWZ8 645 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 CMTM8Q8IZV2 173 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms