RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 NFKBIBQ15653 356 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 ZSCAN23Q3MJ62 389 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 PAQR9Q6ZVX9 377 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 ARHGEF19Q8IW93 802 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 NPAS3Q8IXF0 933 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 C12orf29Q8N999 325 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 SLC2A14Q8TDB8 520 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 ING5Q8WYH8 240 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 TCEAL4Q96EI5 215 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 SMARCD1Q96GM5 515 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 C8orf48Q96LL4 319 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 HEXIM2Q96MH2 286 aaKnown RBP21.43■■□□□ 1.02
HOXC6-204ENST00000509328 HNRNPABQ99729 332 aaKnown RBP21.43■■□□□ 1.02
HOXC6-204ENST00000509328 ZNF334Q9HCZ1 680 aaPredicted RBP21.43■■□□□ 1.02
HOXC6-204ENST00000509328 FAM49BQ9NUQ9 324 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 PATJQ8NI35 1801 aa21.43■■□□□ 1.02
HOXC6-204ENST00000509328 SLC38A8A6NNN8 435 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 SMTNL1A8MU46 457 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 F8VP50 259 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 PES1O00541 588 aaKnown RBP21.42■■□□□ 1.02
HOXC6-204ENST00000509328 NOL4O94818 638 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 TPM2P07951 284 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 HMGA1P17096 107 aaKnown RBP21.42■■□□□ 1.02
HOXC6-204ENST00000509328 CEBPBP17676 345 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 SLC9A1P19634 815 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 ZNF165P49910 485 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 KRT31Q15323 416 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 PHLDB3Q6NSJ2 640 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 RRAGAQ7L523 313 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 SLC4A11Q8NBS3 891 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 ANKRD20A12PQ8NF67 263 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 SHKBP1Q8TBC3 707 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 JAKMIP2Q96AA8 810 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 CYFIP2Q96F07 1278 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 FAM81BQ96LP2 452 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 TAB2Q9NYJ8 693 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 GDE1Q9NZC3 331 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 LIMD1Q9UGP4 676 aa21.42■■□□□ 1.02
HOXC6-204ENST00000509328 BDP1A6H8Y1 2624 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 MOSPD3O75425 235 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 ZNF18P17022 549 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 ACO1P21399 889 aaKnown RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 PON1P27169 355 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 GABRR2P28476 465 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 CDC25CP30307 473 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 CACNA2D1P54289 1103 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 MTMR3Q13615 1198 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 GAREM2Q75VX8 874 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 ENOSF1Q7L5Y1 443 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 STKLD1Q8NE28 680 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 KAT5Q92993 513 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 TRMT2BQ96GJ1 504 aaKnown RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 MYRFLQ96LU7 910 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 GCNAQ96QF7 691 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 IL21Q9HBE4 155 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 UBE2TQ9NPD8 197 aaPredicted RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 DMAP1Q9NPF5 467 aaPredicted RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 KRT82Q9NSB4 513 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 TMEM30AQ9NV96 361 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 EHD2Q9NZN4 543 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 UXTQ9UBK9 157 aaPredicted RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 LIMA1Q9UHB6 759 aaKnown RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 MAGED2Q9UNF1 606 aaPredicted RBP21.41■■□□□ 1.02
HOXC6-204ENST00000509328 PCDHB4Q9Y5E5 795 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 ANAPC1Q9H1A4 1944 aa21.41■■□□□ 1.02
HOXC6-204ENST00000509328 A0A1W2PRU2 124 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 DLL1O00548 723 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 AP1G2O75843 785 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 GJA1P17302 382 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 CDK11BP21127 795 aaKnown RBP21.4■■□□□ 1.02
HOXC6-204ENST00000509328 ADORA2BP29275 332 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 MFAP3P55082 362 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 TMEM270Q6UE05 265 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 DENND5BQ6ZUT9 1274 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 DHX40Q8IX18 779 aaKnown RBP21.4■■□□□ 1.02
HOXC6-204ENST00000509328 MCRS1Q96EZ8 462 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 KREMEN1Q96MU8 473 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 GPR88Q9GZN0 384 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 VPS16Q9H269 839 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 HSD3B7Q9H2F3 369 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 IGSF9Q9P2J2 1179 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 APEX2Q9UBZ4 518 aa21.4■■□□□ 1.02
HOXC6-204ENST00000509328 NUP210Q8TEM1 1887 aaPredicted RBP21.4■■□□□ 1.02
HOXC6-204ENST00000509328 NRG2O14511 850 aaPredicted RBP21.39■■□□□ 1.01
HOXC6-204ENST00000509328 CAVIN2O95810 425 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 FAM200BP0CF97 657 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 TEAD2Q15562 447 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 PPP1R26Q5T8A7 1209 aaPredicted RBP21.39■■□□□ 1.01
HOXC6-204ENST00000509328 ARHGAP17Q68EM7 881 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 NXPE3Q969Y0 559 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 KCNK16Q96T55 309 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 ATXN3LQ9H3M9 355 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 CSNK1G1Q9HCP0 422 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 KIAA1257Q9ULG3 409 aa21.39■■□□□ 1.01
HOXC6-204ENST00000509328 LRRC10BA6NIK2 292 aa21.38■■□□□ 1.01
HOXC6-204ENST00000509328 ANHXE9PGG2 379 aa21.38■■□□□ 1.01
HOXC6-204ENST00000509328 F11P03951 625 aa21.38■■□□□ 1.01
HOXC6-204ENST00000509328 PAEPP09466 180 aa21.38■■□□□ 1.01
HOXC6-204ENST00000509328 COPB1P53618 953 aaKnown RBP21.38■■□□□ 1.01
HOXC6-204ENST00000509328 ARHGAP15Q53QZ3 475 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms