RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 SMARCD1Q96GM5 515 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 NOX5Q96PH1 765 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 CPXM1Q96SM3 734 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 DUSP16Q9BY84 665 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 RHOBTB2Q9BYZ6 727 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 ST7Q9NRC1 585 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 GUCA1BQ9UMX6 200 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 CDY1Q9Y6F8 540 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 CEP290O15078 2479 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 AP1G2O75843 785 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 BEST1O76090 585 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 CPB1P15086 417 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 RPL17P18621 184 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 BDNFP23560 247 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 DNAJB2P25686 324 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 SLC8A3P57103 927 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 GPC5P78333 572 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 PMF1Q6P1K2 205 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 CLEC20AQ6ZU45 233 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 FBXO22Q8NEZ5 403 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 TRIM11Q96F44 468 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 PGLYRP2Q96PD5 576 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 PLVAPQ9BX97 442 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 MYO1AQ9UBC5 1043 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 TJP2Q9UDY2 1190 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 YBX2Q9Y2T7 364 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 BACE2Q9Y5Z0 518 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 PLXNA4Q9HCM2 1894 aa15.67■□□□□ 0.1
SNCAIP-211ENST00000509023 MACROD2A1Z1Q3 448 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 PBX2P40425 430 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 RGS7P49802 495 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 CACNA2D1P54289 1103 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 MAP3K7CLP57077 242 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 NFE2Q16621 373 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 CYP4A22Q5TCH4 519 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 SLC8B1Q6J4K2 584 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 MSANTD4Q8NCY6 345 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 AUTS2Q8WXX7 1259 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 VCPIP1Q96JH7 1222 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 ZBP1Q9H171 429 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 SYNCQ9H7C4 482 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 ALG13Q9NP73 1137 aaKnown RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 ABI2Q9NYB9 513 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 CNOT8Q9UFF9 292 aaKnown RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 CHORDC1Q9UHD1 332 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 TNRC18O15417 2968 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 C5orf67F2Z3F1 127 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 XPO1O14980 1071 aaKnown RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 ADAM12O43184 909 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 ERBB2P04626 1255 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 CALB1P05937 261 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 MYBL1P10243 752 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 RRM1P23921 792 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 BMP8BP34820 402 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 PLA2G4AP47712 749 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 RGS19P49795 217 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 GPR17Q13304 367 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 LLGL2Q6P1M3 1020 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 PHLDB2Q86SQ0 1253 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 IPO4Q8TEX9 1081 aaKnown RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 STK32AQ8WU08 396 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 SMOQ99835 787 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 PBX4Q9BYU1 374 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 MRPL17Q9NRX2 175 aaKnown RBP15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 TMEM30AQ9NV96 361 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 SALL4Q9UJQ4 1053 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 PAXBP1Q9Y5B6 917 aa15.66■□□□□ 0.1
SNCAIP-211ENST00000509023 NCANO14594 1321 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 PTPRDP23468 1912 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 MYH10P35580 1976 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 BTNL10A8MVZ5 291 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 E5RJQ4 531 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 PIK3R2O00459 728 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 CTSAP10619 480 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 OR1D2P34982 312 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 ROR1Q01973 937 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 CFAP221Q4G0U5 840 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 LIN9Q5TKA1 542 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 RNF19BQ6ZMZ0 732 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 PIGZQ86VD9 579 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 ZMIZ2Q8NF64 920 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 RFFLQ8WZ73 363 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 C18orf8Q96DM3 657 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 FUBP3Q96I24 572 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 KCNK16Q96T55 309 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 CLSTN3Q9BQT9 956 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 IRX2Q9BZI1 471 aaPredicted RBP15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 STRIP2Q9ULQ0 834 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 PCDHB5Q9Y5E4 795 aa15.65■□□□□ 0.1
SNCAIP-211ENST00000509023 LAMA3Q16787 3333 aa15.64■□□□□ 0.09
SNCAIP-211ENST00000509023 WDR27A2RRH5 827 aa15.64■□□□□ 0.09
SNCAIP-211ENST00000509023 MTMR11A4FU01 709 aa15.64■□□□□ 0.09
SNCAIP-211ENST00000509023 BUB1O43683 1085 aa15.64■□□□□ 0.09
SNCAIP-211ENST00000509023 ZNF500O60304 480 aaPredicted RBP15.64■□□□□ 0.09
SNCAIP-211ENST00000509023 CYP1A2P05177 515 aa15.64■□□□□ 0.09
SNCAIP-211ENST00000509023 CYP2F1P24903 491 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms