RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 PHACTR2O75167 634 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 TACC1O75410 805 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 GNL1P36915 607 aaPredicted RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 GRIK1P39086 918 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 MAGEA11P43364 429 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 RPS9P46781 194 aaKnown RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 RPL10AP62906 217 aaKnown RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 PSMD2Q13200 908 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 TRPC3Q13507 836 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 ZNF699Q32M78 642 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 ERCC4Q92889 916 aaPredicted RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 TRMT2BQ96GJ1 504 aaKnown RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 SNX25Q9H3E2 840 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 EBF3Q9H4W6 596 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 OBP2AQ9NY56 170 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 CGNQ9P2M7 1197 aaKnown RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 USP25Q9UHP3 1055 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 MRPS17Q9Y2R5 130 aaKnown RBP13.69□□□□□ -0.22
NR1I3-225ENST00000508387 DMXL1Q9Y485 3027 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 CACNA1IQ9P0X4 2223 aa13.69□□□□□ -0.22
NR1I3-225ENST00000508387 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 PDXKO00764 312 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 RHOBTB3O94955 611 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 ZNF202O95125 648 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
NR1I3-225ENST00000508387 TDGF1P13385 188 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 PTPN1P18031 435 aaKnown RBP13.68□□□□□ -0.22
NR1I3-225ENST00000508387 WEE1P30291 646 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 AVPR1AP37288 418 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 CLDN10P78369 228 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 ZXDBP98169 803 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 SATB1Q01826 763 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 DMWDQ09019 674 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 IFRD2Q12894 506 aaPredicted RBP13.68□□□□□ -0.22
NR1I3-225ENST00000508387 PNOCQ13519 176 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 NCOA4Q13772 614 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 C4orf50Q6ZRC1 276 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 SLC9A9Q8IVB4 645 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 CELF5Q8N6W0 485 aaKnown RBP13.68□□□□□ -0.22
NR1I3-225ENST00000508387 ARL14EPQ8N8R7 260 aaPredicted RBP13.68□□□□□ -0.22
NR1I3-225ENST00000508387 GOLGA5Q8TBA6 731 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 EEF2KMTQ96G04 330 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 FAM83CQ9BQN1 747 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 B3GNT5Q9BYG0 378 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 SCAND2PQ9GZW5 306 aaPredicted RBP13.68□□□□□ -0.22
NR1I3-225ENST00000508387 GKN1Q9NS71 199 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 TDP1Q9NUW8 608 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
NR1I3-225ENST00000508387 PIEZO1Q92508 2521 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 A8MXQ7 604 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 SCAMP3O14828 347 aaKnown RBP13.67□□□□□ -0.22
NR1I3-225ENST00000508387 NCAM2O15394 837 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 AKAP3O75969 853 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 USP4Q13107 963 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 ZNF77Q15935 545 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 PKN3Q6P5Z2 889 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 DCLK2Q8N568 766 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
NR1I3-225ENST00000508387 NELL2Q99435 816 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 POLR3BQ9NW08 1133 aaPredicted RBP13.67□□□□□ -0.22
NR1I3-225ENST00000508387 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
NR1I3-225ENST00000508387 FBXO4Q9UKT5 387 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 TRAF3IP3Q9Y228 551 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
NR1I3-225ENST00000508387 ZFHX2Q9C0A1 2572 aaPredicted RBP13.67□□□□□ -0.22
NR1I3-225ENST00000508387 MYO16Q9Y6X6 1858 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 LMNAP02545 664 aaKnown RBP13.66□□□□□ -0.22
NR1I3-225ENST00000508387 MYL1P05976 194 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 CKMP06732 381 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 CCDC130P13994 396 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 NR2F2P24468 414 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
NR1I3-225ENST00000508387 ATICP31939 592 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 MAGEA9P43362 315 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 MTF1Q14872 753 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 ITPRIPL2Q3MIP1 535 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 ZACNQ401N2 412 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 ZCWPW2Q504Y3 356 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 ZNF667Q5HYK9 610 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 DENND5BQ6ZUT9 1274 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 PAQR9Q6ZVX9 377 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 SV2AQ7L0J3 742 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
NR1I3-225ENST00000508387 SPATA17Q96L03 361 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms