RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 MORC3Q14149 939 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 DCAF17Q5H9S7 520 aaPredicted RBP16.55■□□□□ 0.24
MED28-204ENST00000506409 TCERG1LQ5VWI1 586 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 PRSS33Q8NF86 280 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
MED28-204ENST00000506409 DNASE1L2Q92874 299 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 RSPRY1Q96DX4 576 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 FAM122AQ96E09 287 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 CEP295NLQ96MC4 621 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 SLC46A2Q9BY10 475 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 ZNF518BQ9C0D4 1074 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 APOBEC3GQ9HC16 384 aaKnown RBP16.55■□□□□ 0.24
MED28-204ENST00000506409 PTPRDP23468 1912 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 F8VP50 259 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 ZNF263O14978 683 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 PRAMEF12O95522 483 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 DDX6P26196 483 aaKnown RBP eCLIP16.54■□□□□ 0.24
MED28-204ENST00000506409 WEE1P30291 646 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 AVPR1AP37288 418 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 PLA2G5P39877 138 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 NDST1P52848 882 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 STARD6P59095 220 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 CAMK4Q16566 473 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 DENND5BQ6ZUT9 1274 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 UNC93AQ86WB7 457 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 YAF2Q8IY57 180 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 CMTM8Q8IZV2 173 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 MAB21L3Q8N8X9 362 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 IRF7Q92985 503 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 C8orf48Q96LL4 319 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 BCO2Q9BYV7 579 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 NIF3L1Q9GZT8 377 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 OBP2AQ9NY56 170 aa16.54■□□□□ 0.24
MED28-204ENST00000506409 ARMCX3Q9UH62 379 aaPredicted RBP16.54■□□□□ 0.24
MED28-204ENST00000506409 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 NUP210Q8TEM1 1887 aaPredicted RBP16.53■□□□□ 0.24
MED28-204ENST00000506409 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 CLDN5O00501 218 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 TADA3O75528 432 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
MED28-204ENST00000506409 PTPN5P54829 565 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 FCHO2Q0JRZ9 810 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 ORC1Q13415 861 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 TXNDC8Q6A555 127 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 TTI2Q6NXR4 508 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 TPRG1Q6ZUI0 275 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 FBXL13Q8NEE6 735 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 CEP63Q96MT8 703 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 MED10Q9BTT4 135 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 FOXQ1Q9C009 403 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 SMG9Q9H0W8 520 aaKnown RBP16.53■□□□□ 0.24
MED28-204ENST00000506409 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 RAB20Q9NX57 234 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 EHD2Q9NZN4 543 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 HMGXB4Q9UGU5 601 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 CTNND2Q9UQB3 1225 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 SIT1Q9Y3P8 196 aa16.53■□□□□ 0.24
MED28-204ENST00000506409 KANSL1LA0AUZ9 987 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 SOBPA7XYQ1 873 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 GALR2O43603 387 aaPredicted RBP16.52■□□□□ 0.24
MED28-204ENST00000506409 LRRN2O75325 713 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 CACNA2D1P54289 1103 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 USP46P62068 366 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 INCA1Q0VD86 236 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 PAK1Q13153 545 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 CBWD6Q4V339 395 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 CBWD3Q5JTY5 395 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 CBWD5Q5RIA9 395 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 FOXR2Q6PJQ5 311 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 FAM35AQ86V20 835 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 MON1AQ86VX9 555 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 CRYBG2Q8N1P7 616 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 CELF5Q8N6W0 485 aaKnown RBP16.52■□□□□ 0.24
MED28-204ENST00000506409 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 PJA1Q8NG27 643 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 BPIFB1Q8TDL5 484 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 SEMA4DQ92854 862 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 LRRC3BQ96PB8 259 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 DUSP9Q99956 384 aaKnown RBP16.52■□□□□ 0.24
MED28-204ENST00000506409 DDX23Q9BUQ8 820 aaKnown RBP16.52■□□□□ 0.24
MED28-204ENST00000506409 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
MED28-204ENST00000506409 TRPC7Q9HCX4 862 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 TRPV5Q9NQA5 729 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 TMEM30AQ9NV96 361 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
MED28-204ENST00000506409 DENND4CQ5VZ89 1909 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 OBSL1O75147 1896 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 COL4A3Q01955 1670 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 CHADO15335 359 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 CCDC130P13994 396 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 CD58P19256 250 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 CD72P21854 359 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 TCF15Q12870 199 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 UBXN2BQ14CS0 331 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms