RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TMEM221A6NGB7 291 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 M0R296 226 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 CSH1P0DML2 217 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 CSH2P0DML3 217 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
SMN1-204ENST00000506163 VIPR2P41587 438 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 WDR44Q5JSH3 913 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 HFE2Q6ZVN8 426 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 FAM35AQ86V20 835 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 CCDC150Q8NCX0 1101 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 ZMIZ2Q8NF64 920 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 ZSCAN18Q8TBC5 510 aaPredicted RBP18.97■□□□□ 0.63
SMN1-204ENST00000506163 TNIP3Q96KP6 325 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 SPATA17Q96L03 361 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 CNOT6LQ96LI5 555 aaKnown RBP18.97■□□□□ 0.63
SMN1-204ENST00000506163 C8orf48Q96LL4 319 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 LRRC3BQ96PB8 259 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 SLC46A2Q9BY10 475 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 CISHQ9NSE2 258 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 FAM49BQ9NUQ9 324 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 TMEM63CQ9P1W3 806 aa18.97■□□□□ 0.63
SMN1-204ENST00000506163 BEST1O76090 585 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 GPC5P78333 572 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 ZNF394Q53GI3 561 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 MTSS1LQ765P7 747 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 UBR7Q8N806 425 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 SLC2A14Q8TDB8 520 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 SMARCD2Q92925 531 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 KAT5Q92993 513 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 TRMT2BQ96GJ1 504 aaKnown RBP18.96■□□□□ 0.63
SMN1-204ENST00000506163 FAXDC2Q96IV6 333 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 SMOQ99835 787 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 NT5C1AQ9BXI3 368 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 TRPV4Q9HBA0 871 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMN1-204ENST00000506163 ZDBF2Q9HCK1 2354 aa18.96■□□□□ 0.63
SMN1-204ENST00000506163 ECI2O75521 394 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 FGFR1OPO95684 399 aaKnown RBP18.95■□□□□ 0.62
SMN1-204ENST00000506163 MBD3O95983 291 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 CCDC192P0DO97 292 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 RAD23BP54727 409 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 CUL2Q13617 745 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 TAF12Q16514 161 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 GPR158Q5T848 1215 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 TXNDC8Q6A555 127 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 ARID3BQ8IVW6 561 aaPredicted RBP18.95■□□□□ 0.62
SMN1-204ENST00000506163 SLC4A11Q8NBS3 891 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 OBSL1O75147 1896 aa18.95■□□□□ 0.62
SMN1-204ENST00000506163 PRR33A8MZF0 331 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 P4HA2O15460 535 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 FGF19O95750 216 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 AFPP02771 609 aaKnown RBP18.94■□□□□ 0.62
SMN1-204ENST00000506163 SRFP11831 508 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 CDC25CP30307 473 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 HSP90AA4PQ58FG1 418 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 VITQ6UXI7 678 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 CREBRFQ8IUR6 639 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 ARHGEF19Q8IW93 802 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 EHBP1Q8NDI1 1231 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 ELSPBP1Q96BH3 223 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 HNRNPABQ99729 332 aaKnown RBP18.94■□□□□ 0.62
SMN1-204ENST00000506163 MED10Q9BTT4 135 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 TTLL2Q9BWV7 592 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 SMG9Q9H0W8 520 aaKnown RBP18.94■□□□□ 0.62
SMN1-204ENST00000506163 SLITRK6Q9H5Y7 841 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 TASP1Q9H6P5 420 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 ZFP14Q9HCL3 533 aa18.94■□□□□ 0.62
SMN1-204ENST00000506163 SAMSN1Q9NSI8 373 aaKnown RBP18.94■□□□□ 0.62
SMN1-204ENST00000506163 ZNF638Q14966 1978 aaKnown RBP18.94■□□□□ 0.62
SMN1-204ENST00000506163 TNFRSF10BO14763 440 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 TRIM66O15016 1216 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 PRAMEF12O95522 483 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 CFHP08603 1231 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 ADORA2BP29275 332 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 GRM2Q14416 872 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 CCDC183Q5T5S1 534 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 C11orf57Q6ZUT1 292 aaPredicted RBP18.93■□□□□ 0.62
SMN1-204ENST00000506163 DENND5BQ6ZUT9 1274 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 CYFIP2Q96F07 1278 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 CEP295NLQ96MC4 621 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 SLC22A12Q96S37 553 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 GPR88Q9GZN0 384 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 THAP9Q9H5L6 903 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 SLC2A4RGQ9NR83 387 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 KRT82Q9NSB4 513 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 ANAPC1Q9H1A4 1944 aa18.93■□□□□ 0.62
SMN1-204ENST00000506163 KRBA1A5PL33 1030 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 AP1G2O75843 785 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 ACO1P21399 889 aaKnown RBP18.92■□□□□ 0.62
SMN1-204ENST00000506163 APBA1Q02410 837 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 PPP1R26Q5T8A7 1209 aaPredicted RBP18.92■□□□□ 0.62
SMN1-204ENST00000506163 PHLDB3Q6NSJ2 640 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 RRAGAQ7L523 313 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 BMP8AQ7Z5Y6 402 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 MAB21L3Q8N8X9 362 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 SCAMP5Q8TAC9 235 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 PBXIP1Q96AQ6 731 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 SMARCD1Q96GM5 515 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 TMEM176AQ96HP8 235 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 CYP2S1Q96SQ9 504 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms