RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NRBP2Q9NSY0 501 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 DUS2Q9NX74 493 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 TJP2Q9UDY2 1190 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ADAMTS1Q9UHI8 967 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 EIF2B4Q9UI10 523 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 SCN1AP35498 2009 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 NSD1Q96L73 2696 aaPredicted RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 TNRC6AQ8NDV7 1962 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 UBE4BO95155 1302 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 A0A087X0B3 334 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 MTMR11A4FU01 709 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 SPDYE3A6NKU9 549 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 MEI4A8MW99 385 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 WDR64B1ANS9 1081 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 IPO8O15397 1037 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 NDUFS2O75306 463 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 USP12O75317 370 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ERLIN2O94905 339 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 LUC7L3O95232 432 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 FGF19O95750 216 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 DDAH2O95865 285 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 LDLRP01130 860 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 IGLV3-19P01714 112 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 CYP17A1P05093 508 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 KRT7P08729 469 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TCF3P15923 654 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 HMGA1P17096 107 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 CD6P30203 668 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TNFSF9P41273 254 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 GRIA4P48058 902 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 CLK2P49760 499 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 NT5C2P49902 561 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 DNM2P50570 870 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 DUSP3P51452 185 aaPredicted RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 AFF3P51826 1226 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 EPHB3P54753 998 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 NPEPPSP55786 919 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 NLRP12P59046 1061 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 CYP4A11Q02928 519 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 FAM160A1Q05DH4 1040 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 MORC3Q14149 939 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TGIF1Q15583 401 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ZC2HC1CQ53FD0 456 aaPredicted RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 GLRA4Q5JXX5 417 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 PRAMEF14Q5SWL7 426 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 PLA2G4FQ68DD2 849 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TXNDC8Q6A555 127 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 SLC27A1Q6PCB7 646 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 USP53Q70EK8 1073 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 METTL3Q86U44 580 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 FERMT3Q86UX7 667 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 PLA2G4DQ86XP0 818 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ETFBKMTQ8IXQ9 262 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TMEM130Q8N3G9 435 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ATAD1Q8NBU5 361 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 RNF149Q8NC42 400 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ENGASEQ8NFI3 743 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 IPO4Q8TEX9 1081 aaKnown RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 FRAT1Q92837 279 aaPredicted RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 EXOC4Q96A65 974 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TMEM143Q96AN5 459 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ERLEC1Q96DZ1 483 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 FAM227BQ96M60 508 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 GABRG3Q99928 467 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 GPR174Q9BXC1 333 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ANO3Q9BYT9 981 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TMEM245Q9H330 911 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 RNF41Q9H4P4 317 aaPredicted RBP3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TM9SF3Q9HD45 589 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 OSGEPQ9NPF4 335 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 DISC1Q9NRI5 854 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 TBC1D22BQ9NU19 505 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 PARP2Q9UGN5 583 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 SATB2Q9UPW6 733 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 SLC27A5Q9Y2P5 690 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 STARD13Q9Y3M8 1113 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 ASB3Q9Y575 518 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 PCDHGA4Q9Y5G9 962 aa3.68□□□□□ -1.82
TCOF1-208ENST00000506063 DDX11L8A8MPP1 907 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 BTBD18B2RXH4 712 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 C10orf142B7Z368 130 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 H7C4K7 107 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 WIPF1O43516 503 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 TRAPPC3O43617 180 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 RTN2O75298 545 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CSO75390 466 aaKnown RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 OAZ2O95190 189 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 PLEKHA8P1O95397 391 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 LARGE1O95461 756 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 WNT1P04628 370 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 EDN1P05305 212 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CYP3A4P08684 503 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 HOXB2P14652 356 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CKMT2P17540 419 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 CDC25CP30307 473 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 ADRA1BP35368 520 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 AVPR1AP37288 418 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 EIF2DP41214 584 aaKnown RBP3.67□□□□□ -1.82
TCOF1-208ENST00000506063 WASP42768 502 aa3.67□□□□□ -1.82
TCOF1-208ENST00000506063 TNFRSF4P43489 277 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms