RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 SMAPO00193 183 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 ACADSBP45954 432 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 VCPP55072 806 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 GSTA5Q7RTV2 222 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 LIMS2Q7Z4I7 341 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 TMEM110Q86TL2 294 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 CMASQ8NFW8 434 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 JOSD2Q8TAC2 188 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 PHACTR1Q9C0D0 580 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 TUBGCP4Q9UGJ1 667 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 TRPV2Q9Y5S1 764 aa18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 CYBAP13498 195 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 KLRC2P26717 231 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 LRPAP1P30533 357 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 MRPS6P82932 125 aaKnown RBP18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 CRHR2Q13324 411 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 ZSCAN26Q16670 478 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 PCGF5Q86SE9 256 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 ALLCQ8N6M5 410 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 TOP6BLQ8N6T0 577 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 TNIP3Q96KP6 325 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 TBCBQ99426 244 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 RSAD1Q9HA92 442 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 C2CD4BA6NLJ0 364 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 KPNA7A9QM74 516 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 FAM155AB1AL88 458 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 ZNF487B1APH4 448 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 RIPK2O43353 540 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 KDELR1P24390 212 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 BCAT1P54687 386 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 BEX3Q00994 111 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 DAB2IPQ5VWQ8 1189 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 RAPGEF5Q92565 580 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 EPB41L4BQ9H329 900 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 GTF2IRD1Q9UHL9 959 aa18.15■□□□□ 0.5
TRAPPC11-204ENST00000505676 C3orf70A6NLC5 250 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 EIF3HO15372 352 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 IRAK1P51617 712 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 HIC1Q14526 733 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 OR6B2Q6IFH4 312 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 MAP7D3Q8IWC1 876 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 OR6B3Q8NGW1 331 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 SLC35F5Q8WV83 523 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 TEKT4Q8WW24 435 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 TMEM40Q8WWA1 233 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 MRPL45Q9BRJ2 306 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 SNX25Q9H3E2 840 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 PCDH9Q9HC56 1237 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 USP18Q9UMW8 372 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 ZNF148Q9UQR1 794 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 IPPQ9Y573 584 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 TRUB2O95900 331 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 AGTP01019 485 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 PAX3P23760 479 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 ATP5DP30049 168 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 RPL34P49207 117 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 ITGA8P53708 1063 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 BST2Q10589 180 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 PDK2Q15119 407 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 OASLQ15646 514 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 BOLA3Q53S33 107 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 FAM47CQ5HY64 1035 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 KCTD16Q68DU8 428 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 ANKRD52Q8NB46 1076 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 APPL2Q8NEU8 664 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 SLC35B2Q8TB61 432 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 LENG1Q96BZ8 264 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 TLCD1Q96CP7 247 aa18.14■□□□□ 0.49
TRAPPC11-204ENST00000505676 A8MXQ7 604 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 PI4K2BG5E9Z4 385 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 PFKMP08237 780 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 C6orf222P0C671 652 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 WARSP23381 471 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 SLC6A3Q01959 620 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 ORC1Q13415 861 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 TFDP2Q14188 446 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 SOWAHAQ2M3V2 549 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 ATP13A4Q4VNC1 1196 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 PPP1R26Q5T8A7 1209 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 KAZNQ674X7 775 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 MFSD5Q6N075 450 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 UBA3Q8TBC4 463 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 HSFY1Q96LI6 401 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 ERICH4A6NGS2 130 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 E5RJQ4 531 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 HUS1O60921 280 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 TCF4P15884 667 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 MIPP30301 263 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 GNGT1P63211 74 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 SLC29A2Q14542 456 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 MORF4L2Q15014 288 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 IZUMO3Q5VZ72 239 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 TWF2Q6IBS0 349 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 HIBCHQ6NVY1 386 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 FAM183BPQ6ZVS7 135 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 ACOT1Q86TX2 421 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 ZCCHC9Q8N567 271 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 ARFGAP1Q8N6T3 406 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms