RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 P4HA1P13674 534 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 AVPR1AP37288 418 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 PMS1P54277 932 aaKnown RBP15.19■□□□□ 0.02
HOXC9-202ENST00000504557 NFIL3Q16649 462 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 EDRF1Q3B7T1 1238 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 ANKRD40Q6AI12 368 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 TMEM150AQ86TG1 271 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 ACOT1Q86TX2 421 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 MFSD6LQ8IWD5 586 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 DTWD2Q8NBA8 298 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 B3GALNT2Q8NCR0 500 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 TAS1R2Q8TE23 839 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 DEPDC1BQ8WUY9 529 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 IRF7Q92985 503 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 IMPG2Q9BZV3 1241 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 ZNF518BQ9C0D4 1074 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 HMGXB4Q9UGU5 601 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 F5P12259 2224 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 KANSL1LA0AUZ9 987 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 FAM170BA6NMN3 283 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 IKBKBO14920 756 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 CD58P19256 250 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 MAGEA11P43364 429 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 CACNA2D1P54289 1103 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 STARD6P59095 220 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 PRKCQQ04759 706 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 STIM1Q13586 685 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 PHLDB3Q6NSJ2 640 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 ALYREFQ86V81 257 aaKnown RBP15.18■□□□□ 0.02
HOXC9-202ENST00000504557 PJA1Q8NG27 643 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 CSGALNACT1Q8TDX6 532 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 TMEM174Q8WUU8 243 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 LRRC3BQ96PB8 259 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 B3GNT5Q9BYG0 378 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 TRPV4Q9HBA0 871 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 FAM49BQ9NUQ9 324 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 UXTQ9UBK9 157 aaPredicted RBP15.18■□□□□ 0.02
HOXC9-202ENST00000504557 CCL26Q9Y258 94 aa15.18■□□□□ 0.02
HOXC9-202ENST00000504557 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 PSMA7O14818 248 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 TRIM66O15016 1216 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 MAPK13O15264 365 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 TADA3O75528 432 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 NOL4O94818 638 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 ASS1P00966 412 aaKnown RBP15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CCDC130P13994 396 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 SOX9P48436 509 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 KPNA1P52294 538 aaPredicted RBP15.17■□□□□ 0.02
HOXC9-202ENST00000504557 NDST1P52848 882 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 USP46P62068 366 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 NOP14P78316 857 aaKnown RBP15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CAMK4Q16566 473 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 DENND5BQ6ZUT9 1274 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CCDC105Q8IYK2 499 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CMTM8Q8IZV2 173 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 ADSSL1Q8N142 457 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CCDC150Q8NCX0 1101 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 BPIFB1Q8TDL5 484 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 DNASE1L2Q92874 299 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 JAKMIP2Q96AA8 810 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 E2F7Q96AV8 911 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CYP2S1Q96SQ9 504 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 VRTNQ9H8Y1 702 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 TMEM8AQ9HCN3 771 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 TMEM30AQ9NV96 361 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 CTNND2Q9UQB3 1225 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 PIAS3Q9Y6X2 628 aa15.17■□□□□ 0.02
HOXC9-202ENST00000504557 C2orf78A6NCI8 922 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 CKMP06732 381 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 GLULP15104 373 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
HOXC9-202ENST00000504557 CCNE1P24864 410 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 TARSP26639 723 aaKnown RBP15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ADORA2BP29275 332 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ASPAP45381 313 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 MXI1P50539 228 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 STX17P56962 302 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 TNK2Q07912 1038 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ANGPT1Q15389 498 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 KRT39Q6A163 491 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ZNF852Q6ZMS4 543 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 FAM35AQ86V20 835 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 CELF5Q8N6W0 485 aaKnown RBP15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ARL14EPQ8N8R7 260 aaPredicted RBP15.16■□□□□ 0.02
HOXC9-202ENST00000504557 SPATA20Q8TB22 786 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 TAF4BQ92750 862 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 TRMT2BQ96GJ1 504 aaKnown RBP15.16■□□□□ 0.02
HOXC9-202ENST00000504557 TNIP3Q96KP6 325 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 SLC22A12Q96S37 553 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ELOVL4Q9GZR5 314 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 APOBEC3GQ9HC16 384 aaKnown RBP15.16■□□□□ 0.02
HOXC9-202ENST00000504557 LTB4R2Q9NPC1 389 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 KRT82Q9NSB4 513 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 GTSE1Q9NYZ3 720 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 ATP8B3O60423 1300 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
HOXC9-202ENST00000504557 MYOFQ9NZM1 2061 aa15.15■□□□□ 0.02
HOXC9-202ENST00000504557 CHADO15335 359 aa15.15■□□□□ 0.02
HOXC9-202ENST00000504557 FAM163BP0C2L3 166 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms