RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FAM228BP0C875 321 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 SETSIPP0DME0 302 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 GZMAP12544 262 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 NPR3P17342 541 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 CYP2F1P24903 491 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 ELF1P32519 619 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 IRS1P35568 1242 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 MAGEA11P43364 429 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 SNX16P57768 344 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 ADCY1Q08828 1119 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 SPA17Q15506 151 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 SLC18A3Q16572 532 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 CLEC16AQ2KHT3 1053 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 CFAP221Q4G0U5 840 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 CCDC122Q5T0U0 273 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 NAA35Q5VZE5 725 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 ACAD10Q6JQN1 1059 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 PPP1R2P3Q6NXS1 205 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 VSTM1Q6UX27 236 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 TTC30AQ86WT1 665 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 PALB2Q86YC2 1186 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 ATAD1Q8NBU5 361 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 ZNF830Q96NB3 372 aaPredicted RBP14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 PCDHGC5Q9Y5F6 944 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 PLXNA4Q9HCM2 1894 aa14.65□□□□□ -0.06
CYSTM1-202ENST00000504227 EIF3CLB5ME19 914 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 RTN2O75298 545 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 NDUFA10O95299 355 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 CYP1A1P04798 512 aaPredicted RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 ATF2P15336 505 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 CDH5P33151 784 aaPredicted RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 GRIK1P39086 918 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 GPD2P43304 727 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 NSFP46459 744 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 TUFMP49411 452 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 MAP3K7CLP57077 242 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 RPL10AP62906 217 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 CCZ1BP86790 482 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 CCZ1P86791 482 aaPredicted RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 GFPT1Q06210 699 aaPredicted RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 PDE4CQ08493 712 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 DUSP4Q13115 394 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 PKDCCQ504Y2 493 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 C10orf76Q5T2E6 689 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 ALKBH5Q6P6C2 394 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 RAD9BQ6WBX8 426 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 SCN4BQ8IWT1 228 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 WDTC1Q8N5D0 677 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 CPA5Q8WXQ8 436 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 SECISBP2LQ93073 1101 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 MRPL38Q96DV4 380 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 TRIM44Q96DX7 344 aaPredicted RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 EIF3CQ99613 913 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 SMOQ99835 787 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 RHOBTB2Q9BYZ6 727 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 UBXN6Q9BZV1 441 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 DMAP1Q9NPF5 467 aaPredicted RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 LUC7LQ9NQ29 371 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 SPTLC3Q9NUV7 552 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 HSFX1Q9UBD0 423 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 NAGPAQ9UK23 515 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 SLC27A5Q9Y2P5 690 aa14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 LAMA2P24043 3122 aaKnown RBP14.64□□□□□ -0.07
CYSTM1-202ENST00000504227 CHD9Q3L8U1 2897 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 TMCO5BA8MYB1 307 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 RFXAPO00287 272 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 PRRG1O14668 218 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 XPO1O14980 1071 aaKnown RBP14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 TRIM66O15016 1216 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 C1RP00736 705 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 HAPLN1P10915 354 aaPredicted RBP14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 UNGP13051 313 aaPredicted RBP14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 NOMO3P69849 1222 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 KRT83P78385 493 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 MTF1Q14872 753 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 MGAT5BQ3V5L5 792 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 CLEC20AQ6ZU45 233 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 ERICH1Q86X53 443 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 C1orf131Q8NDD1 294 aaKnown RBP14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 STK32AQ8WU08 396 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 SLC35F5Q8WV83 523 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 PPP2R3CQ969Q6 453 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 SEPT5Q99719 369 aaPredicted RBP14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 MIS12Q9H081 205 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 KCNF1Q9H3M0 494 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 TLE6Q9H808 572 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 CYP4F11Q9HBI6 524 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 CSNK1G1Q9HCP0 422 aa14.63□□□□□ -0.07
CYSTM1-202ENST00000504227 F8VP50 259 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 TGM5O43548 720 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 CLASP2O75122 1294 aaKnown RBP14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 BEST1O76090 585 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 LCA5LO95447 670 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 VNN2O95498 520 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 GLUD1P00367 558 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 FTLP02792 175 aaPredicted RBP14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 ACADSBP45954 432 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms