RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SRGNP10124 158 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 CKBP12277 381 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZKSCAN1P17029 563 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 RPL17P18621 184 aaKnown RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 EN2P19622 333 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 GRIA3P42263 894 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 PRIM2P49643 509 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF135P52742 658 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ARFIP2P53365 341 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 OS9Q13438 667 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 HABP2Q14520 560 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 NOMO2Q5JPE7 1267 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC9A4Q6AI14 798 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF783Q6ZMS7 281 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 USP37Q86T82 979 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 SRLQ86TD4 932 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 FAM186BQ8IYM0 893 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 VGLL2Q8N8G2 317 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 OR6B3Q8NGW1 331 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 NUP133Q8WUM0 1156 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 KBTBD7Q8WVZ9 684 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 SCAMP4Q969E2 229 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 RNF31Q96EP0 1072 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 MARS2Q96GW9 593 aaKnown RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC39A13Q96H72 371 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 SUCLG2Q96I99 432 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 KLHL32Q96NJ5 620 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 STRBPQ96SI9 672 aaKnown RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 MYD88Q99836 296 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ELAC2Q9BQ52 826 aaKnown RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 TLR10Q9BXR5 811 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 BTBD1Q9H0C5 482 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 SACM1LQ9NTJ5 587 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 STK32BQ9NY57 414 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 AGAP1Q9UPQ3 857 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 MED16Q9Y2X0 877 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 E9PLN8 166 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 H3BNC9 293 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 M0QYG6 137 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 DNAJB5O75953 348 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 UNC5CO95185 931 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 KIF20AO95235 890 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 GPANK1O95872 356 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 THP07101 528 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 PRR35P0CG20 571 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 FCER1AP12319 257 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 FGFR4P22455 802 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 KELP23276 732 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 CERS1P27544 350 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 ALDH5A1P51649 535 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLFN5Q08AF3 891 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC13A2Q13183 592 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 CTBP1Q13363 440 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 C3orf38Q5JPI3 329 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 RUSC1-AS1Q66K80 236 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 FOXR2Q6PJQ5 311 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 NEK8Q86SG6 692 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 MORC1Q86VD1 984 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 SESTD1Q86VW0 696 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 NSUN7Q8NE18 718 aaKnown RBP2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 DDB2Q92466 427 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 MAML1Q92585 1016 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 DDX17Q92841 729 aaKnown RBP2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 GJA10Q969M2 543 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 CCDC138Q96M89 665 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 PNKPQ96T60 521 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 VKORC1Q9BQB6 163 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 TMEM79Q9BSE2 394 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 TINAGL1Q9GZM7 467 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 SIK2Q9H0K1 926 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 CPNE5Q9HCH3 593 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 NLRC4Q9NPP4 1024 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 IL17RBQ9NRM6 502 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 FNIP2Q9P278 1114 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 AFF4Q9UHB7 1163 aaKnown RBP2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 CDYLQ9Y232 598 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 TBC1D30Q9Y2I9 924 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 NOTCH4Q99466 2003 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 AATKQ6ZMQ8 1374 aa2.98□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF521Q96K83 1311 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 CCDC78A2IDD5 438 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 POM121BA6NF01 834 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 F8W8V4 182 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 GCOM1H8Y6P7 765 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 MYO1CO00159 1063 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 FOXN3O00409 490 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 POLRMTO00411 1230 aaKnown RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 VPS4BO75351 444 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 IL18RAPO95256 599 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 CHEK2O96017 543 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 GRPP07492 148 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 PIM1P11309 404 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 TKTP29401 623 aaKnown RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SERPINB3P29508 390 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 STT3AP46977 705 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 TM4SF4P48230 202 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC11A2P49281 568 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 CASP5P51878 434 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 UCP3P55916 312 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 RPS16P62249 146 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms