RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 KCNA4P22459 653 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 B3GNT6Q6ZMB0 384 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 PID1Q7Z2X4 250 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 PIGWQ7Z7B1 504 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 LDHDQ86WU2 507 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 PGBD4Q96DM1 585 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 EFCAB1Q9HAE3 211 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 KCNK4Q9NYG8 393 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 DCTN2Q13561 401 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SGSM1Q2NKQ1 1148 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SMTNL2Q2TAL5 461 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 C4orf32Q8N8J7 132 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 FAM13CQ8NE31 585 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 GLIS3Q8NEA6 775 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNRF3Q9ULT6 936 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ANGPTL3Q9Y5C1 460 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 C2CD2LO14523 706 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 OTUD4Q01804 1114 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNF568Q3ZCX4 644 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 TERB1Q8NA31 727 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 LNX1Q8TBB1 728 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ETNPPLQ8TBG4 499 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 CYGBQ8WWM9 190 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 CCDC28BQ9BUN5 200 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ILKAPQ9H0C8 392 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SALL4Q9UJQ4 1053 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 INPP5FQ9Y2H2 1132 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 DCDC2CA8MYV0 355 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SRP72O76094 671 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 TPP2P29144 1249 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 TRIM16LQ309B1 348 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 AADACL2Q6P093 401 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 DNAJC19Q96DA6 116 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 CBWD1Q9BRT8 395 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ARMCX1Q9P291 453 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 CNTFP26441 200 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SREBF1P36956 1147 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 FUT2Q10981 343 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 MCOLN2Q8IZK6 566 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 DEFB107AQ8IZN7 70 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 OR6B3Q8NGW1 331 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ZBTB18Q99592 522 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 SH2D3AQ9BRG2 576 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 AKT3Q9Y243 479 aa17.9■□□□□ 0.46
HMGXB3-201ENST00000502717 ANGPT2O15123 496 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 EXTL3O43909 919 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 APOA1P02647 267 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 MARSP56192 900 aaKnown RBP17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 PSMC6P62333 389 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 TNFAIP2Q03169 654 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 TBL3Q12788 808 aaKnown RBP17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 STX5Q13190 355 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 SMAD1Q15797 465 aaKnown RBP17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 TMC2Q8TDI7 906 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 EXT2Q93063 718 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 NEUROG2Q9H2A3 272 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 AVENQ9NQS1 362 aaPredicted RBP17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 DDX18Q9NVP1 670 aaKnown RBP17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 NMRK1Q9NWW6 199 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 TBX20Q9UMR3 447 aa17.89■□□□□ 0.46
HMGXB3-201ENST00000502717 KIF1AQ12756 1690 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 DGKIO75912 1065 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 TRPC1P48995 793 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 CUL2Q13617 745 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 SKIV2LQ15477 1246 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 FAM167AQ96KS9 214 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 ADNPQ9H2P0 1102 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 PALMDQ9NP74 551 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 H0Y626 953 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 RGL2O15211 777 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 CYTH3O43739 400 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 TRIM16O95361 564 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 NPTXRO95502 500 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 POLBP06746 335 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 CBWD2Q8IUF1 395 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 NLRP4Q96MN2 994 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 WDR46O15213 610 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 TLR2O60603 784 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 DAB1O75553 588 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 C2orf40Q9H1Z8 148 aa17.89■□□□□ 0.45
HMGXB3-201ENST00000502717 DPPA5A6NC42 116 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 AP3B1O00203 1094 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 PLOD1Q02809 727 aaPredicted RBP17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 UGP2Q16851 508 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 Q3C1V9 767 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 FITM2Q8N6M3 262 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 PIK3R5Q8WYR1 880 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 TASP1Q9H6P5 420 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 PRR12Q9ULL5 1215 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 SLC12A4Q9UP95 1085 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 A8MUI8 341 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 TNPO2O14787 897 aaKnown RBP17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 FANCGO15287 622 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 EDF1O60869 148 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms