RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 FSHRP23945 695 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 GRIK1P39086 918 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 GPR15P49685 360 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 APBA1Q02410 837 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 ZP2Q05996 745 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 CYP4A22Q5TCH4 519 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 GJB7Q6PEY0 223 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 TMEM270Q6UE05 265 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 SLC2A14Q8TDB8 520 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 GIPC2Q8TF65 315 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 SMARCD1Q96GM5 515 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 MED10Q9BTT4 135 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 LRRC3Q9BY71 257 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 ASAH2Q9NR71 780 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 KIAA1257Q9ULG3 409 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 OBSL1O75147 1896 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 C19orf67A6NJJ6 358 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 F8VP50 259 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 ZNF197O14709 1029 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 MICAL2O94851 1124 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 CSH1P0DML2 217 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 CSH2P0DML3 217 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 ANXA13P27216 316 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 ZNF132P52740 706 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 CACNA2D1P54289 1103 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 UBXN1Q04323 297 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 PRSS36Q5K4E3 855 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 PPP1R26Q5T8A7 1209 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-228ENST00000498814 SDHAF4Q5VUM1 108 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 ARHGAP17Q68EM7 881 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 PDZD4Q76G19 769 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-228ENST00000498814 OTOP3Q7RTS5 596 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 TMC8Q8IU68 726 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 HS6ST3Q8IZP7 471 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 GPR152Q8TDT2 470 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 ADAMTS19Q8TE59 1207 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 CSNK1G1Q9HCP0 422 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 KRT82Q9NSB4 513 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 TMEM30AQ9NV96 361 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.51■□□□□ 0.23
CPNE1-228ENST00000498814 DNAJC12Q9UKB3 198 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
CPNE1-228ENST00000498814 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
CPNE1-228ENST00000498814 SLC38A8A6NNN8 435 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 LOC730098B7Z3J9 87 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 RNF225M0QZC1 329 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 AP1G2O75843 785 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 NOL4O94818 638 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 FGF19O95750 216 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 VDRP11473 427 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 HMGA1P17096 107 aaKnown RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 RFX1P22670 979 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 ADORA2BP29275 332 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 TAF12Q16514 161 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 SLC5A9Q2M3M2 681 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 SGO2Q562F6 1265 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 KLHDC7AQ5VTJ3 777 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 RBBP8NLQ8NC74 664 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 ITFG1Q8TB96 612 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 SHC3Q92529 594 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 TRMT2BQ96GJ1 504 aaKnown RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 RPGRIP1Q96KN7 1286 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 MYRFLQ96LU7 910 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 KCNK16Q96T55 309 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 DMAP1Q9NPF5 467 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
CPNE1-228ENST00000498814 SIK3Q9Y2K2 1263 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 A0A0C4DFX4 3053 aa16.5■□□□□ 0.23
CPNE1-228ENST00000498814 MYO10Q9HD67 2058 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 FAM200BP0CF97 657 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 MYL4P12829 197 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 KRT5P13647 590 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 UCHL3P15374 230 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 CCR2P41597 374 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 SYCP1Q15431 976 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 ARHGAP44Q17R89 818 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-228ENST00000498814 SMOQ99835 787 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 NAA15Q9BXJ9 866 aaKnown RBP16.49■□□□□ 0.23
CPNE1-228ENST00000498814 DUSP16Q9BY84 665 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 IL21Q9HBE4 155 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 ZNF334Q9HCZ1 680 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-228ENST00000498814 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 UXTQ9UBK9 157 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-228ENST00000498814 AJAP1Q9UKB5 411 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-228ENST00000498814 DAAM1Q9Y4D1 1078 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 ZFP37Q9Y6Q3 630 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-228ENST00000498814 ANAPC1Q9H1A4 1944 aa16.49■□□□□ 0.23
CPNE1-228ENST00000498814 A0A1B0GTH6 734 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 MOSPD3O75425 235 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 BEST1O76090 585 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 SERPINC1P01008 464 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 CD19P15391 556 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms