RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	FGF14	Q92915	247 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	SYAP1	Q96A49	352 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	TCEAL4	Q96EI5	215 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	IMPG2	Q9BZV3	1241 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	KCNH6	Q9H252	994 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZFP14	Q9HCL3	533 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	ARHGEF3	Q9NR81	526 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	TMPRSS4	Q9NRS4	437 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	CEP72	Q9P209	647 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	SIX4	Q9UIU6	781 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	MAPK8IP1	Q9UQF2	711 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	PTPRD	P23468	1912 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	MYO16	Q9Y6X6	1858 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	FAM237A	A0A1B0GTK4	181 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810		A0A1W2PRU2	124 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	ANHX	E9PGG2	379 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PDXK	O00764	312 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	KIN	O60870	393 aa	Known RBP	11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	RHOBTB3	O94955	611 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	FBXO45	P0C2W1	286 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	P4HA1	P13674	534 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	GJA1	P17302	382 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	NR2F2	P24468	414 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	RPL13	P26373	211 aa	Known RBP	11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	ANXA13	P27216	316 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	GABRR2	P28476	465 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	CDC25C	P30307	473 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PLA2G5	P39877	138 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PIK3CA	P42336	1068 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	AP3M2	P53677	418 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	VCP	P55072	806 aa	Known RBP	11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PFKP	Q01813	784 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	FAM160A1	Q05DH4	1040 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	DPYD	Q12882	1025 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PNOC	Q13519	176 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	TEAD2	Q15562	447 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	MAPRE1	Q15691	268 aa	Known RBP	11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	SCARA5	Q6ZMJ2	495 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	C4orf50	Q6ZRC1	276 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	OR6B3	Q8NGW1	331 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	SPATA18	Q8TC71	538 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	GIPC2	Q8TF65	315 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	SMARCE1	Q969G3	411 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PSMG2	Q969U7	264 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	SHD	Q96IW2	340 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	TSG101	Q99816	390 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	LPIN3	Q9BQK8	851 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	SYT15	Q9BQS2	421 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	ACBD6	Q9BR61	282 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	PI4K2A	Q9BTU6	479 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	GPR88	Q9GZN0	384 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	ATXN3L	Q9H3M9	355 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	MMRN2	Q9H8L6	949 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	BRD9	Q9H8M2	597 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	AVEN	Q9NQS1	362 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	GDAP2	Q9NXN4	497 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	HSFX1	Q9UBD0	423 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	WNT16	Q9UBV4	365 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	TRIO	O75962	3097 aa		11.41	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZDBF2	Q9HCK1	2354 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	TTLL8	A6PVC2	850 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	ERVH48-1	M5A8F1	160 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	VSIG8	P0DPA2	414 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	AVPR2	P30518	371 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	CASP4	P49662	377 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	PSMC1	P62191	440 aa	Known RBP	11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	RPL10A	P62906	217 aa	Known RBP	11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	CYP27A1	Q02318	531 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	SNW1	Q13573	536 aa	Known RBP	11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	STIM1	Q13586	685 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	GRM2	Q14416	872 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	KCNB1	Q14721	858 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	WDR72	Q3MJ13	1102 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZNF667	Q5HYK9	610 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	PRSS36	Q5K4E3	855 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	DPH6	Q7L8W6	267 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	SCN4B	Q8IWT1	228 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	CCDC150	Q8NCX0	1101 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	RTP3	Q9BQQ7	232 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	CRISPLD1	Q9H336	500 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	TBC1D17	Q9HA65	648 aa		11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	HELZ	P42694	1942 aa	Known RBP	11.4	□□□□□ -0.58
CDK11A-222	ENST00000498810	ATP8B3	O60423	1300 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	LILRA1	O75019	489 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	ECI2	O75521	394 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	MICAL2	O94851	1124 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	PDGFRB	P09619	1106 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	CSH1	P0DML2	217 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	CSH2	P0DML3	217 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	HAPLN1	P10915	354 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	EPB41	P11171	864 aa	Known RBP	11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	ATF6	P18850	670 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	ATIC	P31939	592 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	CCR2	P41597	374 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	CYP4F8	P98187	520 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	NCOA4	Q13772	614 aa		11.39	□□□□□ -0.59
CDK11A-222	ENST00000498810	MLF2	Q15773	248 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms