RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 ORC1Q13415 861 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 VSTM1Q6UX27 236 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 MAB21L3Q8N8X9 362 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 DEPDC1BQ8WUY9 529 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 TAF4BQ92750 862 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 E2F7Q96AV8 911 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 TRMT2BQ96GJ1 504 aaKnown RBP15.43■□□□□ 0.06
PDAP1-204ENST00000496335 SHDQ96IW2 340 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 MYRFLQ96LU7 910 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 ZNF518BQ9C0D4 1074 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 APOBEC3GQ9HC16 384 aaKnown RBP15.43■□□□□ 0.06
PDAP1-204ENST00000496335 HMGXB4Q9UGU5 601 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 SIT1Q9Y3P8 196 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 MTF2Q9Y483 593 aaPredicted RBP15.43■□□□□ 0.06
PDAP1-204ENST00000496335 PIEZO1Q92508 2521 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 COL4A2P08572 1712 aa15.43■□□□□ 0.06
PDAP1-204ENST00000496335 KANSL1LA0AUZ9 987 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 F8VP50 259 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 ZNF263O14978 683 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 P4HA1P13674 534 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 NDST1P52848 882 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 NUBP1P53384 320 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 PTPN5P54829 565 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 MCCD1P59942 119 aaPredicted RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 USP46P62068 366 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 FKBP3Q00688 224 aaKnown RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 ENPEPQ07075 957 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 TPRG1Q6ZUI0 275 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 ACOT1Q86TX2 421 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 ZC3H3Q8IXZ2 948 aaKnown RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 YAF2Q8IY57 180 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 CCDC105Q8IYK2 499 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 CMTM8Q8IZV2 173 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 MRPS31Q92665 395 aaKnown RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 SEMA4DQ92854 862 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 DNASE1L2Q92874 299 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 IRF7Q92985 503 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 ZFYVE19Q96K21 471 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 SPATA17Q96L03 361 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 PHOX2BQ99453 314 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 DDX23Q9BUQ8 820 aaKnown RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 TMEM8AQ9HCN3 771 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 FAM86C1Q9NVL1 165 aa15.42■□□□□ 0.06
PDAP1-204ENST00000496335 UXTQ9UBK9 157 aaPredicted RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 KIF26AQ9ULI4 1882 aaPredicted RBP15.42■□□□□ 0.06
PDAP1-204ENST00000496335 SHISA7A6NL88 538 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 GLULP15104 373 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 CCNE1P24864 410 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 ANXA13P27216 316 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 WEE1P30291 646 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 UBE2HP62256 183 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 NOP14P78316 857 aaKnown RBP15.41■□□□□ 0.06
PDAP1-204ENST00000496335 FCHO2Q0JRZ9 810 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 MORC3Q14149 939 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 UBXN2BQ14CS0 331 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 TCERG1LQ5VWI1 586 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 KRT39Q6A163 491 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 KLHL10Q6JEL2 608 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 PAQR9Q6ZVX9 377 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 MON1AQ86VX9 555 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 DTWD2Q8NBA8 298 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 PJA1Q8NG27 643 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 TNIP3Q96KP6 325 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 C8orf48Q96LL4 319 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 CYP2S1Q96SQ9 504 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 BCO2Q9BYV7 579 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 IMPG2Q9BZV3 1241 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 ELOVL4Q9GZR5 314 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 TRPC7Q9HCX4 862 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 DLGAP2Q9P1A6 1054 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 CCL26Q9Y258 94 aa15.41■□□□□ 0.06
PDAP1-204ENST00000496335 FAM170BA6NMN3 283 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 PPP1R3GB7ZBB8 358 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 ARNTLO00327 626 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 PSMA7O14818 248 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 TRIM66O15016 1216 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 CHADO15335 359 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 GTF2H1P32780 548 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 AVPR1AP37288 418 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 MXI1P50539 228 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 LRRC63Q05C16 580 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 STIM1Q13586 685 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 CAMK4Q16566 473 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 DCAF17Q5H9S7 520 aaPredicted RBP15.4■□□□□ 0.06
PDAP1-204ENST00000496335 DENND5BQ6ZUT9 1274 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 FAM35AQ86V20 835 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 CELF5Q8N6W0 485 aaKnown RBP15.4■□□□□ 0.06
PDAP1-204ENST00000496335 TTC8Q8TAM2 541 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 BPIFB1Q8TDL5 484 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 USP13Q92995 863 aaPredicted RBP15.4■□□□□ 0.06
PDAP1-204ENST00000496335 DHTKD1Q96HY7 919 aaPredicted RBP15.4■□□□□ 0.06
PDAP1-204ENST00000496335 TWNKQ96RR1 684 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 SLC22A12Q96S37 553 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 KCNK16Q96T55 309 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 DUSP9Q99956 384 aaKnown RBP15.4■□□□□ 0.06
PDAP1-204ENST00000496335 MED10Q9BTT4 135 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 LTB4R2Q9NPC1 389 aa15.4■□□□□ 0.06
PDAP1-204ENST00000496335 OBP2AQ9NY56 170 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms