RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 HSPH1Q92598 858 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 NIFKQ9BYG3 293 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 RAB6CQ9H0N0 254 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 AFG3L2Q9Y4W6 797 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 CENPFP49454 3210 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 A0A0G2JND7 137 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PIK3R2O00459 728 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PEX11AO75192 247 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 TOM1L1O75674 476 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 SGSM1Q2NKQ1 1148 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PPP1R2P3Q6NXS1 205 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 NPNTQ6UXI9 565 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 MAB21L3Q8N8X9 362 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 RNF149Q8NC42 400 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 TTC8Q8TAM2 541 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 DCAKDQ8WVC6 231 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PRR11Q96HE9 360 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 CALN1Q9BXU9 219 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 ACSS3Q9H6R3 686 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 HMGXB4Q9UGU5 601 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 KCNG1Q9UIX4 513 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 MGAMO43451 1857 aa13.65□□□□□ -0.23
PTPN7-217ENST00000495688 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 SPDYE16A6NNV3 312 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 B4GALT5O43286 388 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 AVILO75366 819 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 KRT19P08727 400 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 HOXC6P09630 235 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 CDH5P33151 784 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 PRKG1Q13976 671 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 CRYMQ14894 314 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 PARP6Q2NL67 630 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 BBS12Q6ZW61 710 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 ACO2Q99798 780 aaKnown RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 FAM167BQ9BTA0 163 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 ZFP69BQ9UJL9 534 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 ZWINTO95229 277 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 STAT5BP51692 787 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 OAZ1P54368 228 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 CTC1Q2NKJ3 1217 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 ZPBP2Q6X784 338 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 CATSPERGQ6ZRH7 1159 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 CLNKQ7Z7G1 428 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 RFX6Q8HWS3 928 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 BANPQ8N9N5 519 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 TWNKQ96RR1 684 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 MIPEPQ99797 713 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 DHRS4Q9BTZ2 278 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 MRPL4Q9BYD3 311 aaKnown RBP13.64□□□□□ -0.23
PTPN7-217ENST00000495688 ZNF518BQ9C0D4 1074 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 PCDHGC3Q9UN70 934 aa13.64□□□□□ -0.23
PTPN7-217ENST00000495688 SIGLEC16A6NMB1 481 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 ABLIM1O14639 778 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 ERBB2P04626 1255 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 RBP3P10745 1247 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 PHBP35232 272 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 TCF7P36402 384 aaPredicted RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 ZNF280AP59817 542 aaPredicted RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 EIF3EP60228 445 aaKnown RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 RASA2Q15283 850 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 RFWD3Q6PCD5 774 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 AGGF1Q8N302 714 aaeCLIP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 KCTD6Q8NC69 237 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 LRRN4Q8WUT4 740 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 SERAC1Q96JX3 654 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 DENND2DQ9H6A0 471 aaPredicted RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 RNPEPL1Q9HAU8 725 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 CPSF3Q9UKF6 684 aaKnown RBP13.63□□□□□ -0.23
PTPN7-217ENST00000495688 GJA3Q9Y6H8 435 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 C2CD2LO14523 706 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 OGTO15294 1046 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 ATP5HO75947 161 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 UPP2O95045 317 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 MAP3K6O95382 1288 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 PRKCBP05771 671 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 MIPP30301 263 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 ELK3P41970 407 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms