RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SLC13A5Q86YT5 568 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 DDX27Q96GQ7 796 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 MIS12Q9H081 205 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 SYNCQ9H7C4 482 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 HMX1Q9NP08 348 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 TSPAN16Q9UKR8 245 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 PADI3Q9ULW8 664 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 SQORQ9Y6N5 450 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 SIGLEC16A6NMB1 481 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 PIGHQ14442 188 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 MRPL10Q7Z7H8 261 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 NIPA2Q8N8Q9 360 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 ZFP42Q96MM3 310 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 TRMT13Q9NUP7 481 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 MTUS1Q9ULD2 1270 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 GIT1Q9Y2X7 761 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 NR2E1Q9Y466 385 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 E7EVH7 732 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 SPTLC1O15269 473 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF623O75123 536 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 GJB6O95452 261 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 ECHS1P30084 290 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 PSMC1P62191 440 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 ACTN3Q08043 901 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 LHX8Q68G74 356 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 C6orf89Q6UWU4 347 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 DPH6Q7L8W6 267 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 XYLT1Q86Y38 959 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 OR6B3Q8NGW1 331 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 FNIP1Q8TF40 1166 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 GOLGA2P5Q9HBQ8 144 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 DNAH12Q6ZR08 3092 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 FAM163BP0C2L3 166 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 MYZAPP0CAP1 466 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 GHRP10912 638 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 KRT3P12035 628 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 CD52P31358 61 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 HSD17B3P37058 310 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 LILRA4P59901 499 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 LPIN1Q14693 890 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 RNF187Q5TA31 235 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 LRRC38Q5VT99 294 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 ACOT1Q86TX2 421 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 KATNAL2Q8IYT4 538 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 APPL2Q8NEU8 664 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 KBTBD7Q8WVZ9 684 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 SAGE1Q9NXZ1 904 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 AMACRQ9UHK6 382 aa19.5■□□□□ 0.71
TSPAN4-212ENST00000494815 A8MXQ7 604 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 H0YGN5 161 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 PHF2O75151 1096 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 ERBB2P04626 1255 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 SETSIPP0DME0 302 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 MLH1P40692 756 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF252P-AS1Q0IIN9 211 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 HLTFQ14527 1009 aaKnown RBP eCLIP19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 ARHGAP17Q68EM7 881 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 CRYBG2Q8N1P7 616 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 TOP6BLQ8N6T0 577 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 C12orf29Q8N999 325 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 GSTCDQ8NEC7 633 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF296Q8WUU4 475 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 LRRC45Q96CN5 670 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 MCRS1Q96EZ8 462 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 DONSONQ9NYP3 566 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 NME7Q9Y5B8 376 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 NFS1Q9Y697 457 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 BHMG1C9JSJ3 638 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 FSCN2O14926 492 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 HUS1O60921 280 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 YY1P25490 414 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 CHRNA3P32297 505 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 GRK4P32298 578 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 HPDP32754 393 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 TAS2R40P59535 323 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 DHX34Q14147 1143 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 DSC3Q14574 896 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 CYP1B1Q16678 543 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 GOLGA7BQ2TAP0 167 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 PKDCCQ504Y2 493 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 ADAT2Q7Z6V5 191 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 UBA3Q8TBC4 463 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 MAIP1Q8WWC4 291 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 GAD1Q99259 594 aa19.49■□□□□ 0.71
TSPAN4-212ENST00000494815 MEIS3P2A8K0S8 358 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 THP07101 528 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 GNL1P36915 607 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 OGDHQ02218 1023 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 IFT88Q13099 833 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 UAP1Q16222 522 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 PPP1R26Q5T8A7 1209 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 PRELID2Q8N945 189 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 EXD1Q8NHP7 514 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 RUNDC3BQ96NL0 473 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 TSPYL2Q9H2G4 693 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 SNX25Q9H3E2 840 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 HESX1Q9UBX0 185 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 TJP2Q9UDY2 1190 aa19.48■□□□□ 0.71
TSPAN4-212ENST00000494815 USTQ9Y2C2 406 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms