RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 FAM114A1Q8IWE2 563 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 CRYBG2Q8N1P7 616 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 SMARCD2Q92925 531 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 SPATA17Q96L03 361 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 ASB16Q96NS5 453 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 RPP25Q9BUL9 199 aaKnown RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 EHD2Q9NZN4 543 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 P4HA2O15460 535 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 CILPO75339 1184 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 ECI2O75521 394 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 NOL4O94818 638 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 CFHP08603 1231 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 SRFP11831 508 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 CCDC130P13994 396 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 MTIF2P46199 727 aaKnown RBP16.93■□□□□ 0.3
LIME1-209ENST00000494776 YWHAEP62258 255 aaKnown RBP16.93■□□□□ 0.3
LIME1-209ENST00000494776 CT47A1Q5JQC4 288 aaPredicted RBP16.93■□□□□ 0.3
LIME1-209ENST00000494776 STXBP5Q5T5C0 1151 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 TANGO2Q6ICL3 276 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 FAM35AQ86V20 835 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 C12orf29Q8N999 325 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 SLC2A14Q8TDB8 520 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 MRPS31Q92665 395 aaKnown RBP16.93■□□□□ 0.3
LIME1-209ENST00000494776 PBXIP1Q96AQ6 731 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 ELSPBP1Q96BH3 223 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 CEP295NLQ96MC4 621 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 HEXIM2Q96MH2 286 aaKnown RBP16.93■□□□□ 0.3
LIME1-209ENST00000494776 NT5C1BQ96P26 610 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 THAP9Q9H5L6 903 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 IL21Q9HBE4 155 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 C11orf16Q9NQ32 467 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 KRT82Q9NSB4 513 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 CISHQ9NSE2 258 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 FAM49BQ9NUQ9 324 aa16.93■□□□□ 0.3
LIME1-209ENST00000494776 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 MYO10Q9HD67 2058 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 DPYSL4O14531 572 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 PMM2O15305 246 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 AP1G2O75843 785 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 F11P03951 625 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 TBXAS1P24557 533 aaPredicted RBP16.92■□□□□ 0.3
LIME1-209ENST00000494776 ADORA2BP29275 332 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 IFRD2Q12894 506 aaPredicted RBP16.92■□□□□ 0.3
LIME1-209ENST00000494776 CUL2Q13617 745 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 POTEHQ6S545 545 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 FUKQ8N0W3 1084 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 CYFIP2Q96F07 1278 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 TRMT2BQ96GJ1 504 aaKnown RBP16.92■□□□□ 0.3
LIME1-209ENST00000494776 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 MED15Q96RN5 788 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 TWNKQ96RR1 684 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 ARID3AQ99856 593 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 MFSD1Q9H3U5 465 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 TASP1Q9H6P5 420 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 DMAP1Q9NPF5 467 aaPredicted RBP16.92■□□□□ 0.3
LIME1-209ENST00000494776 ZMYM5Q9UJ78 669 aa16.92■□□□□ 0.3
LIME1-209ENST00000494776 DDX6P26196 483 aaKnown RBP eCLIP16.91■□□□□ 0.34e-8■■□□□ 14.4
LIME1-209ENST00000494776 VIPR2P41587 438 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 CACNA2D1P54289 1103 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 GPC5P78333 572 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 RBM43Q6ZSC3 357 aaKnown RBP16.91■□□□□ 0.3
LIME1-209ENST00000494776 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 ARID3BQ8IVW6 561 aaPredicted RBP16.91■□□□□ 0.3
LIME1-209ENST00000494776 PPM1KQ8N3J5 372 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 WHAMMQ8TF30 809 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 E2F7Q96AV8 911 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 FAM122AQ96E09 287 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 KCNK16Q96T55 309 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 PLA2G2FQ9BZM2 168 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 FAM124BQ9H5Z6 455 aaPredicted RBP16.91■□□□□ 0.3
LIME1-209ENST00000494776 ANO10Q9NW15 660 aa16.91■□□□□ 0.3
LIME1-209ENST00000494776 ARIH1Q9Y4X5 557 aaPredicted RBP16.91■□□□□ 0.3
LIME1-209ENST00000494776 FAM200BP0CF97 657 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 RFX1P22670 979 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 FCARP24071 287 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 AVPR1AP37288 418 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 MAP3K7CLP57077 242 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 TXNDC8Q6A555 127 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 PAQR9Q6ZVX9 377 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
LIME1-209ENST00000494776 YAF2Q8IY57 180 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 NUP93Q8N1F7 819 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 ASIC4Q96FT7 647 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 TMEM176AQ96HP8 235 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 HNRNPABQ99729 332 aaKnown RBP16.9■□□□□ 0.3
LIME1-209ENST00000494776 TRMT61BQ9BVS5 477 aaKnown RBP16.9■□□□□ 0.3
LIME1-209ENST00000494776 SLC46A2Q9BY10 475 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 TRPV4Q9HBA0 871 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 TRPC7Q9HCX4 862 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 TRPM5Q9NZQ8 1165 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 WNT16Q9UBV4 365 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 RAPGEFL1Q9UHV5 662 aa16.9■□□□□ 0.3
LIME1-209ENST00000494776 CA14Q9ULX7 337 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms