RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PMF1Q6P1K2 205 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 CRYBG2Q8N1P7 616 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 SLC35F5Q8WV83 523 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 ARL8AQ96BM9 186 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 LRRC45Q96CN5 670 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 ZNF560Q96MR9 790 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 FMO2Q99518 471 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 SYNCQ9H7C4 482 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 AGO3Q9H9G7 860 aaKnown RBP11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 SPC25Q9HBM1 224 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 PTPN22Q9Y2R2 807 aa11.19□□□□□ -0.62
PRPF4B-209ENST00000494674 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 M0QZ92 97 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 XPOTO43592 962 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RPS6KA5O75582 802 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 LMO2P25791 158 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 TAF6P49848 677 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 AFF1P51825 1210 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 LILRA4P59901 499 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 COPS2P61201 443 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 SP3Q02447 781 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 KRT17Q04695 432 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 TRIM71Q2Q1W2 868 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 FAM47CQ5HY64 1035 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 FAM102AQ5T9C2 384 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 OLFML1Q6UWY5 402 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 TMEM110Q86TL2 294 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 KHSRPQ92945 711 aaKnown RBP eCLIP11.18□□□□□ -0.627e-9■■■■□ 22.7
PRPF4B-209ENST00000494674 ART4Q93070 314 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 CAPNS2Q96L46 248 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 FAM118BQ9BPY3 351 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 FAM204AQ9H8W3 233 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 DDX56Q9NY93 547 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 PIK3R2O00459 728 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 KRT14P02533 472 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 GBP1P32455 592 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RPL34P49207 117 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RGS7P49802 495 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 ZNF143P52747 638 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 PLTPP55058 493 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 PDE4CQ08493 712 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 SV2CQ496J9 727 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RAB6CQ53S08 254 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RHBDF2Q6PJF5 856 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 LRIG3Q6UXM1 1119 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 SYDE1Q6ZW31 735 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RSPH3Q86UC2 560 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 STK32AQ8WU08 396 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 EXOC4Q96A65 974 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 PEBP4Q96S96 227 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 RAB6CQ9H0N0 254 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 CHST12Q9NRB3 414 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-209ENST00000494674 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 A8MXQ7 604 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 GOLGA8KD6RF30 607 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 DPYSL4O14531 572 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 PAPSS1O43252 624 aaPredicted RBP11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 LIASO43766 372 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 OPA1O60313 960 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 MGEA5O60502 916 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 CCDC130P13994 396 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 WARSP23381 471 aaKnown RBP11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 MIPP30301 263 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 MLH1P40692 756 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 ZNF844Q08AG5 666 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 DSC3Q14574 896 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 ACAP1Q15027 740 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 CCDC142Q17RM4 750 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 TFDP3Q5H9I0 405 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 DRICH1Q6PGQ1 229 aaPredicted RBP11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 MRPL10Q7Z7H8 261 aaKnown RBP11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 ADGRF2Q8IZF7 708 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 TOP6BLQ8N6T0 577 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 CMASQ8NFW8 434 aaPredicted RBP11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 LPPQ93052 612 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 CNPY3Q9BT09 278 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 FAM129AQ9BZQ8 928 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 MIOSQ9NXC5 875 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 PSD3Q9NYI0 1048 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 WHRNQ9P202 907 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 CACNG4Q9UBN1 327 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 SRRDQ9UH36 339 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 PTPRDP23468 1912 aa11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 ZNF638Q14966 1978 aaKnown RBP11.17□□□□□ -0.62
PRPF4B-209ENST00000494674 RPLP2P05387 115 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms