RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 VAMP7P51809 220 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 KPNA1P52294 538 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-216ENST00000494613 PNOCQ13519 176 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 NFIL3Q16649 462 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 ZACNQ401N2 412 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 ZNF667Q5HYK9 610 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 TTC8Q8TAM2 541 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-216ENST00000494613 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 LMAN1LQ9HAT1 526 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 TDP1Q9NUW8 608 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 SPATA6Q9NWH7 488 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-216ENST00000494613 GTSE1Q9NYZ3 720 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 CCL26Q9Y258 94 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 ZFHX2Q9C0A1 2572 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-216ENST00000494613 LAMTOR5O43504 91 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 NR2F2P24468 414 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 RPL13P26373 211 aaKnown RBP16.64■□□□□ 0.25
LIMS2-216ENST00000494613 MAGEA9P43362 315 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 ASCL5Q7RTU5 278 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 CEP295NLQ96MC4 621 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 B3GNT5Q9BYG0 378 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 SDCBP2Q9H190 292 aa16.64■□□□□ 0.25
LIMS2-216ENST00000494613 C8orf33Q9H7E9 229 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-216ENST00000494613 CLDN5O00501 218 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 TADA3O75528 432 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 PSMC2P35998 433 aaKnown RBP16.63■□□□□ 0.25
LIMS2-216ENST00000494613 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 SOX9P48436 509 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 USP46P62068 366 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 TNK2Q07912 1038 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-216ENST00000494613 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 NKD2Q969F2 451 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-216ENST00000494613 C8orf48Q96LL4 319 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 SLC22A12Q96S37 553 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 FAM83CQ9BQN1 747 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 R4GN57 208 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 CACNA1IQ9P0X4 2223 aa16.63■□□□□ 0.25
LIMS2-216ENST00000494613 F8VP50 259 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 TRIM66O15016 1216 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 CHRNB1P11230 501 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 HDCP19113 662 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 ANXA13P27216 316 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 PRCPP42785 496 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 CACNA2D1P54289 1103 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 MCCD1P59942 119 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-216ENST00000494613 CSTF1Q05048 431 aaKnown RBP16.62■□□□□ 0.25
LIMS2-216ENST00000494613 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 DENND5BQ6ZUT9 1274 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 INTS8Q75QN2 995 aaKnown RBP16.62■□□□□ 0.25
LIMS2-216ENST00000494613 RALGPS2Q86X27 583 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-216ENST00000494613 FAM186BQ8IYM0 893 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 ARL14EPQ8N8R7 260 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-216ENST00000494613 TAF4BQ92750 862 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-216ENST00000494613 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 GSDMAQ96QA5 445 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 TRPC7Q9HCX4 862 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 GCNT4Q9P109 453 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 FBXO4Q9UKT5 387 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
LIMS2-216ENST00000494613 F5P12259 2224 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 C2orf78A6NCI8 922 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 PRR23AA6NEV1 266 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 SPECC1L-ADORA2AF8WAN1 911 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 CLSTN1O94985 981 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 ASS1P00966 412 aaKnown RBP16.61■□□□□ 0.25
LIMS2-216ENST00000494613 HLA-DRAP01903 254 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 KRT13P13646 458 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 P4HA1P13674 534 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 GCLMP48507 274 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
LIMS2-216ENST00000494613 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 PPP3CAQ08209 521 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 MTAPQ13126 283 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-216ENST00000494613 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 SPOPLQ6IQ16 392 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 TXNDC11Q6PKC3 985 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 MAMSTRQ6ZN01 415 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 PAQR9Q6ZVX9 377 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 ACOT1Q86TX2 421 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 CRYBG2Q8N1P7 616 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 RIN3Q8TB24 985 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 TNIP3Q96KP6 325 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 TIGD1Q96MW7 591 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 KCNK16Q96T55 309 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 TTLL2Q9BWV7 592 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 SEMA4AQ9H3S1 761 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.61■□□□□ 0.25
LIMS2-216ENST00000494613 RMND1Q9NWS8 449 aa16.61■□□□□ 0.25
LIMS2-216ENST00000494613 TRPM5Q9NZQ8 1165 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms