RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TRIM43Q96BQ3 446 aaPredicted RBP5.38□□□□□ -1.55
SMC4-224ENST00000494612 NMD3Q96D46 503 aaKnown RBP5.38□□□□□ -1.55
SMC4-224ENST00000494612 ZNF518BQ9C0D4 1074 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 RNPEPQ9H4A4 650 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 CERS4Q9HA82 394 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 TMEM74BQ9NUR3 256 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 ETAA1Q9NY74 926 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 TLK1Q9UKI8 766 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.38□□□□□ -1.55
SMC4-224ENST00000494612 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 APOL1O14791 398 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 IKBKBO14920 756 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 DCLK1O15075 740 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 ZFPL1O95159 310 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 CHEK2O96017 543 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 C1RP00736 705 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 HARSP12081 509 aaKnown RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 TM4SF4P48230 202 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 TOB1P50616 345 aaPredicted RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 LILRA4P59901 499 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 POU6F2P78424 691 aaPredicted RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 FPGSQ05932 587 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 PIGFQ07326 219 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 PMS2P11Q13670 270 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 LONRF3Q496Y0 759 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 PREPLQ4J6C6 727 aaPredicted RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 SP5Q6BEB4 398 aaPredicted RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 GGT6Q6P531 493 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 ZNF280BQ86YH2 543 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 TXLNBQ8N3L3 684 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 OR2C3Q8N628 320 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 TMEM125Q96AQ2 219 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 SNX22Q96L94 193 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 Q96MF0 132 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 SPATA5L1Q9BVQ7 753 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 DPH1Q9BZG8 443 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 UNKQ9C0B0 810 aaKnown RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 SIK2Q9H0K1 926 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 A1CFQ9NQ94 594 aaKnown RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 SEMA4GQ9NTN9 838 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 FOXJ2Q9P0K8 574 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 CTTNBP2NLQ9P2B4 639 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 HESX1Q9UBX0 185 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 TESQ9UGI8 421 aaKnown RBP5.37□□□□□ -1.55
SMC4-224ENST00000494612 RAD54BQ9Y620 910 aa5.37□□□□□ -1.55
SMC4-224ENST00000494612 A0A087WWL8 130 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 CCDC195A0A1B0GUA6 201 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 F5H423 210 aaPredicted RBP5.36□□□□□ -1.55
SMC4-224ENST00000494612 hCG_1984214I3L0E3 225 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 RAB27BO00194 218 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 SUN1O94901 812 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 MT-ND5P03915 603 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 TSHRP16473 764 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 RPL17P18621 184 aaKnown RBP5.36□□□□□ -1.55
SMC4-224ENST00000494612 ZNF134P52741 427 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 MAPK10P53779 464 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 FOXF2Q12947 444 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 CHAF1AQ13111 956 aaPredicted RBP5.36□□□□□ -1.55
SMC4-224ENST00000494612 IQCB1Q15051 598 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 GEN1Q17RS7 908 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 LAYNQ6UX15 382 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 TOGARAM2Q6ZUX3 1019 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 PPP1R32Q7Z5V6 425 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 LRRC46Q96FV0 321 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 BOD1Q96IK1 185 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 DUSP26Q9BV47 211 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 ALOXE3Q9BYJ1 711 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 CHST8Q9H2A9 424 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 PLCB1Q9NQ66 1216 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 MRPS17Q9Y2R5 130 aaKnown RBP5.36□□□□□ -1.55
SMC4-224ENST00000494612 CEP83Q9Y592 693 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 NOX1Q9Y5S8 564 aa5.36□□□□□ -1.55
SMC4-224ENST00000494612 COL3A1P02461 1466 aaPredicted RBP5.36□□□□□ -1.55
SMC4-224ENST00000494612 MYADML2A6NDP7 307 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 F5H697 171 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 H7C4K7 107 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 MGST3O14880 152 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 RBMXL2O75526 392 aaKnown RBP5.35□□□□□ -1.55
SMC4-224ENST00000494612 SETSIPP0DME0 302 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 KCNA2P16389 499 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 HTR3AP46098 478 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 GCLCP48506 637 aaPredicted RBP5.35□□□□□ -1.55
SMC4-224ENST00000494612 CARSP49589 748 aaKnown RBP5.35□□□□□ -1.55
SMC4-224ENST00000494612 CXADRP78310 365 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 HTRA4P83105 476 aaPredicted RBP5.35□□□□□ -1.55
SMC4-224ENST00000494612 KRT17Q04695 432 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 STK3Q13188 491 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 MORC3Q14149 939 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 ARL13BQ3SXY8 428 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 SPDYE7PQ495Y7 208 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 PLA1AQ53H76 456 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 TMEM108Q6UXF1 575 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 Q6ZNX1 250 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 RNF44Q7L0R7 432 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 KCTD20Q7Z5Y7 419 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 RNF152Q8N8N0 203 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 Q8NA96 180 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 ATP11CQ8NB49 1132 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms