RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SCAMP3O14828 347 aaKnown RBP10.32□□□□□ -0.76
UBR4-216ENST00000494503 TADA3O75528 432 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 RHOBTB1O94844 696 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 PRPF6O94906 941 aaKnown RBP10.32□□□□□ -0.76
UBR4-216ENST00000494503 TNNC2P02585 160 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 HDCP19113 662 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 HOXA6P31267 233 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 LHX1P48742 406 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 CASP5P51878 434 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 RBP5P82980 135 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 FBXO43Q4G163 708 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 N4BP2L1Q5TBK1 243 aaPredicted RBP10.32□□□□□ -0.76
UBR4-216ENST00000494503 ANO7Q6IWH7 933 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 C4orf50Q6ZRC1 276 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 HS2ST1Q7LGA3 356 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 OSTM1Q86WC4 334 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 CAMKK1Q8N5S9 505 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 RIN3Q8TB24 985 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 SH3RF2Q8TEC5 729 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 LOXL4Q96JB6 756 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 SYT15Q9BQS2 421 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 CBWD1Q9BRT8 395 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 EDEM2Q9BV94 578 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 ST6GALNAC4Q9H4F1 302 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 ABCB6Q9NP58 842 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 VPS45Q9NRW7 570 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 PANK4Q9NVE7 773 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 MAGEC2Q9UBF1 373 aaPredicted RBP10.32□□□□□ -0.76
UBR4-216ENST00000494503 KMT2BQ9UMN6 2715 aaPredicted RBP10.32□□□□□ -0.76
UBR4-216ENST00000494503 MYOFQ9NZM1 2061 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 MYH10P35580 1976 aa10.32□□□□□ -0.76
UBR4-216ENST00000494503 KIAA1549LQ6ZVL6 1849 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 CEP295Q9C0D2 2601 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 CCDC163A0A0D9SF12 145 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 ATP2C2O75185 946 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 NOL4O94818 638 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 NFATC1O95644 943 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 CAVIN2O95810 425 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 BDNFP23560 247 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 PDE6CP51160 858 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 ZNF268Q14587 947 aaPredicted RBP10.31□□□□□ -0.76
UBR4-216ENST00000494503 ZNF77Q15935 545 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 PLK5Q496M5 336 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 USP39Q53GS9 565 aaKnown RBP10.31□□□□□ -0.76
UBR4-216ENST00000494503 FAM173BQ6P4H8 233 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 CCDC73Q6ZRK6 1079 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 GPD1LQ8N335 351 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 CCDC33Q8N5R6 958 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 TOP6BLQ8N6T0 577 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 LRRC52Q8N7C0 313 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 PDILTQ8N807 584 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 LEO1Q8WVC0 666 aaPredicted RBP10.31□□□□□ -0.76
UBR4-216ENST00000494503 MYLPFQ96A32 169 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 TRMT2BQ96GJ1 504 aaKnown RBP10.31□□□□□ -0.76
UBR4-216ENST00000494503 HPDLQ96IR7 371 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 TMEM206Q9H813 350 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 SMPD4Q9NXE4 827 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 TRPM5Q9NZQ8 1165 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 BCCIPQ9P287 314 aaKnown RBP eCLIP10.31□□□□□ -0.76
UBR4-216ENST00000494503 PCDHGA5Q9Y5G8 931 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 GON4LQ3T8J9 2241 aa10.31□□□□□ -0.76
UBR4-216ENST00000494503 PPP1R37O75864 691 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 AKAP3O75969 853 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 DLATP10515 647 aaKnown RBP10.3□□□□□ -0.76
UBR4-216ENST00000494503 PDCP20941 246 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 GARTP22102 1010 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 DHPSP49366 369 aaPredicted RBP10.3□□□□□ -0.76
UBR4-216ENST00000494503 NOVA1P51513 510 aaKnown RBP10.3□□□□□ -0.76
UBR4-216ENST00000494503 LIMK1P53667 647 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 POU5F1Q01860 360 aaKnown RBP10.3□□□□□ -0.76
UBR4-216ENST00000494503 USP4Q13107 963 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 ALCAMQ13740 583 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 EML3Q32P44 896 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 UAP1L1Q3KQV9 507 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 MDH1BQ5I0G3 518 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 SCARA3Q6AZY7 606 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 ARMCX6Q7L4S7 300 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 SYT13Q7L8C5 426 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 CYP2U1Q7Z449 544 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 CCDC65Q8IXS2 484 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 PGBD3Q8N328 593 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 RDH13Q8NBN7 331 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 CCDC26Q8TAB7 109 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 FGFBP2Q9BYJ0 223 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 LINC00597Q9H2U6 94 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
UBR4-216ENST00000494503 FBXO2Q9UK22 296 aaPredicted RBP10.3□□□□□ -0.76
UBR4-216ENST00000494503 PTPRDP23468 1912 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
UBR4-216ENST00000494503 ZNF233A6NK53 670 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 C4orf47A7E2U8 309 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
UBR4-216ENST00000494503 TRIM66O15016 1216 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms