RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 HTRA1Q92743 480 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 DACT3Q96B18 629 aaPredicted RBP4.81□□□□□ -1.64
CMSS1-207ENST00000494412 GRAMD1AQ96CP6 724 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 ZBTB10Q96DT7 871 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 TRAPPC9Q96Q05 1148 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 MESP1Q9BRJ9 268 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 TLR10Q9BXR5 811 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
CMSS1-207ENST00000494412 C12orf65Q9H3J6 166 aaKnown RBP4.81□□□□□ -1.64
CMSS1-207ENST00000494412 SPON1Q9HCB6 807 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 XPNPEP3Q9NQH7 507 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 PRDM8Q9NQV8 689 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 DKK4Q9UBT3 224 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 CA14Q9ULX7 337 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 CAPN11Q9UMQ6 739 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 DTNAQ9Y4J8 743 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 AFG3L2Q9Y4W6 797 aa4.81□□□□□ -1.64
CMSS1-207ENST00000494412 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 PRR5-ARHGAP8B1AHC4 643 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 B4E171 279 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 H0Y3Z8 333 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 RFXAPO00287 272 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 DCLK1O15075 740 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 RGS10O43665 173 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 ZSCAN22P10073 491 aaPredicted RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 TSPAN7P41732 249 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 AFF3P51826 1226 aaKnown RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 LILRA4P59901 499 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 ACTR2P61160 394 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 UBE3AQ05086 875 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 BOP1Q14137 746 aaKnown RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 EFR3AQ14156 821 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 TRIM71Q2Q1W2 868 aaKnown RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 BTBD16Q32M84 506 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 MGAT5BQ3V5L5 792 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 NOMO2Q5JPE7 1267 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 CCDC30Q5VVM6 783 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 LAYNQ6UX15 382 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 SLC30A10Q6XR72 485 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 C4orf50Q6ZRC1 276 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 MED25Q71SY5 747 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 GOLGA1Q92805 767 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 C3orf49Q96BT1 292 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 RRP36Q96EU6 259 aaKnown RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 ZNF512Q96ME7 567 aaPredicted RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 RBM15Q96T37 977 aaKnown RBP eCLIP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 SMOQ99835 787 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 DDX23Q9BUQ8 820 aaKnown RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
CMSS1-207ENST00000494412 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 ZBTB26Q9HCK0 441 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 HELLSQ9NRZ9 838 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 ETAA1Q9NY74 926 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 FAM30AQ9NZY2 134 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 POGKQ9P215 609 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 SHOC2Q9UQ13 582 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 HPSEQ9Y251 543 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 CDY1Q9Y6F8 540 aa4.8□□□□□ -1.64
CMSS1-207ENST00000494412 A0A1B0GTL3 188 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 TCERG1O14776 1098 aaKnown RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 FIBPO43427 364 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 CCNT2O60583 730 aaKnown RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 KRT38O76015 456 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 PRSS23O95084 383 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 VIPP01282 170 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 SEC24CP53992 1094 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 PIGFQ07326 219 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 TCF15Q12870 199 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 GPS1Q13098 491 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 FZD5Q13467 585 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 ZNF750Q32MQ0 723 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 ZIK1Q3SY52 487 aaPredicted RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 VWA3BQ502W6 1294 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 GPATCH4Q5T3I0 446 aaKnown RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 RINT1Q6NUQ1 792 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 EFCAB12Q6NXP0 572 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 FAM111BQ6SJ93 734 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 FAM83AQ86UY5 434 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 KBTBD2Q8IY47 623 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 NRSN1Q8IZ57 195 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 CFAP52Q8N1V2 620 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 TCP11L2Q8N4U5 519 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 NSUN7Q8NE18 718 aaKnown RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 OR6Y1Q8NGX8 325 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 CEP70Q8NHQ1 597 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 BPIFB1Q8TDL5 484 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 ADAMTS17Q8TE56 1095 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 UCMAQ8WVF2 138 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 HVCN1Q96D96 273 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 MBD6Q96DN6 1003 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 BORCS6Q96GS4 357 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 LCORQ96JN0 433 aaPredicted RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 BARD1Q99728 777 aaKnown RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 CPPED1Q9BRF8 314 aaPredicted RBP4.79□□□□□ -1.64
CMSS1-207ENST00000494412 SLC46A2Q9BY10 475 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 BRD8Q9H0E9 1235 aa4.79□□□□□ -1.64
CMSS1-207ENST00000494412 NELFAQ9H3P2 528 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms