RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 WLSQ5T9L3 541 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 TPGS2Q68CL5 300 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 VITQ6UXI7 678 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 DSTYKQ6XUX3 929 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
HDAC6-234ENST00000493923 LRRTM3Q86VH5 581 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 APPL2Q8NEU8 664 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 SAAL1Q96ER3 474 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 FAXDC2Q96IV6 333 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 ASB16Q96NS5 453 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 HEBP1Q9NRV9 189 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 TMLHEQ9NVH6 421 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 GGA2Q9UJY4 613 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 SIT1Q9Y3P8 196 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 ZFP37Q9Y6Q3 630 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-234ENST00000493923 DNAH14Q0VDD8 3507 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 OBSL1O75147 1896 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 GOLGA6L7A0A1B0GV03 622 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 KANSL1LA0AUZ9 987 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 GOLGA8IPA6NC78 632 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 GOLGA8JA6NMD2 632 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 KINO60870 393 aaKnown RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 TBCAO75347 108 aaKnown RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 ECI2O75521 394 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 BMP15O95972 392 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 SP9P0CG40 484 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 HOXD13P35453 343 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 EMP3P54852 163 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 YWHAHQ04917 246 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 TMEM132DQ14C87 1099 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 UBXN2BQ14CS0 331 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 SLC39A14Q15043 492 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 CAMK4Q16566 473 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 FILIP1LQ4L180 1135 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 RRAGBQ5VZM2 374 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 LMBRD2Q68DH5 695 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 ADALQ6DHV7 355 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 OVOS1Q6IE37 1185 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 CENPPQ6IPU0 288 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 TRIM65Q6PJ69 517 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 TPRG1Q6ZUI0 275 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 GAREM2Q75VX8 874 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 MTSS1LQ765P7 747 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 RASSF8Q8NHQ8 419 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 CXorf38Q8TB03 319 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 LEO1Q8WVC0 666 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 N4BP2L2Q92802 583 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 LPIN3Q9BQK8 851 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 CBWD1Q9BRT8 395 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 ST6GALNAC4Q9H4F1 302 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 LTB4R2Q9NPC1 389 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 GDE1Q9NZC3 331 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 AGO2Q9UKV8 859 aaKnown RBP8.73□□□□□ -1.01
HDAC6-234ENST00000493923 L1RE1Q9UN81 338 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 FAM169AQ9Y6X4 670 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 PTPRJQ12913 1337 aa8.73□□□□□ -1.01
HDAC6-234ENST00000493923 A0A1W2PRU2 124 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 FRMD3A2A2Y4 597 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 FAM170BA6NMN3 283 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 SRRM3A6NNA2 597 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 H0YCG3 227 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ARNTLO00327 626 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 PRPF6O94906 941 aaKnown RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 CYP11A1P05108 521 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ATF6P18850 670 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 TYMPP19971 482 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 RFX1P22670 979 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 CASP1P29466 404 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 SOX9P48436 509 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 GPR15P49685 360 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 GPR17Q13304 367 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 SDHAF4Q5VUM1 108 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 WSCD1Q658N2 575 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 TSSK4Q6SA08 328 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 PDZD4Q76G19 769 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 RTL10Q7L3V2 364 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 TMC6Q7Z403 805 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 OSTM1Q86WC4 334 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 C1orf210Q8IVY1 113 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 APLFQ8IW19 511 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ADSSL1Q8N142 457 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 PDILTQ8N807 584 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 RIN3Q8TB24 985 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ZSCAN18Q8TBC5 510 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 RUBCNQ92622 972 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ELSPBP1Q96BH3 223 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 FAM213AQ9BRX8 229 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 IRF2BPLQ9H1B7 796 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 PCIF1Q9H4Z3 704 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 FAM204AQ9H8W3 233 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ACTR5Q9H9F9 607 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 IL21Q9HBE4 155 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 DPP3Q9NY33 737 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 STK17AQ9UEE5 414 aa8.72□□□□□ -1.01
HDAC6-234ENST00000493923 NUP210Q8TEM1 1887 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 ZNF638Q14966 1978 aaKnown RBP8.72□□□□□ -1.01
HDAC6-234ENST00000493923 OR6C75A6NL08 312 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms