RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 LIX1LQ8IVB5 337 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 CMIPQ8IY22 773 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 SLC15A3Q8IY34 581 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 CLRN3Q8NCR9 226 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 CNNM3Q8NE01 707 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 OR9A1PQ8NGU1 263 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 DEPDC1BQ8WUY9 529 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 TTC9Q92623 222 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 HDAC10Q969S8 669 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 EFHD2Q96C19 240 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-220ENST00000492859 C18orf8Q96DM3 657 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 C7orf34Q96L11 122 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 IFT74Q96LB3 600 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 MNTQ99583 582 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 LRFN3Q9BTN0 628 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 NUP85Q9BW27 656 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 PINK1Q9BXM7 581 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 API5Q9BZZ5 524 aaKnown RBP4.45□□□□□ -1.7
BRCA1-220ENST00000492859 ZCCHC2Q9C0B9 1178 aaKnown RBP4.45□□□□□ -1.7
BRCA1-220ENST00000492859 ANKRD2Q9GZV1 360 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 CCDC86Q9H6F5 360 aaKnown RBP4.45□□□□□ -1.7
BRCA1-220ENST00000492859 WDR26Q9H7D7 661 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 PNPLA8Q9NP80 782 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 TMEM39AQ9NV64 488 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 TMEM160Q9NX00 188 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 SLC39A1Q9NY26 324 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 RGL1Q9NZL6 768 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 SCAF8Q9UPN6 1271 aaKnown RBP4.45□□□□□ -1.7
BRCA1-220ENST00000492859 CAMK2AQ9UQM7 478 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 NAALADL1Q9UQQ1 740 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 CBY1Q9Y3M2 126 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 COMMD3-BMI1R4GMX3 469 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 IGSF1Q8N6C5 1336 aa4.45□□□□□ -1.7
BRCA1-220ENST00000492859 RNF103-CHMP3A0A140T963 221 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 A0A1W2PQU0 124 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 A4D1N5 150 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LGALS16A8MUM7 142 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RNF103O00237 685 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TRIM38O00635 465 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PGRMC2O15173 223 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 B3GALT2O43825 422 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CBFA2T3O75081 653 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LRRN2O75325 713 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TMEM63AO94886 807 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 UBXN7O94888 489 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CST3P01034 146 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GALTP07902 379 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RETP07949 1114 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NR3C2P08235 984 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RLBP1P12271 317 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 POU2F1P14859 743 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TFE3P19532 575 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 BMP6P22004 513 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GLRA2P23416 452 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MCM3P25205 808 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GUCY1A2P33402 732 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PPP1R2P41236 205 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MAGEA4P43358 317 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CBX5P45973 191 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PCP4P48539 62 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CCR9P51686 369 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 INHBCP55103 352 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EIF3EP60228 445 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 IL2P60568 153 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RAC3P60763 192 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 UBE2IP63279 158 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ASIC1P78348 528 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ARF5P84085 180 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FOXK2Q01167 660 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CREMQ03060 361 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PTK2Q05397 1052 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 STK4Q13043 487 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LRRC32Q14392 662 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GRM2Q14416 872 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CRYMQ14894 314 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RAB3GAP1Q15042 981 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 BCL2A1Q16548 175 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 INSCQ1MX18 579 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MPEG1Q2M385 716 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SMU1Q2TAY7 513 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ZNF805Q5CZA5 627 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 BMP2KLQ5H9B9 411 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NBPF12Q5TAG4 269 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 C12orf60Q5U649 245 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PPP1R2P3Q6NXS1 205 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CCDC62Q6P9F0 684 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TRAT1Q6PIZ9 186 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NPNTQ6UXI9 565 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 BEND4Q6ZU67 534 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NLRP9Q7RTR0 991 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 HERC6Q8IVU3 1022 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DENND6AQ8IWF6 608 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SCUBE1Q8IWY4 988 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PHC2Q8IXK0 858 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SYT2Q8N9I0 419 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DNAAF3Q8N9W5 541 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LPCAT1Q8NF37 534 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FIBINQ8TAL6 211 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KCNG4Q8TDN1 519 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms