RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 MYL6P60660 151 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 DLG4P78352 724 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 FKBP3Q00688 224 aaKnown RBP15.68■□□□□ 0.1
SS18L1-205ENST00000492466 PAK1Q13153 545 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 NCOA4Q13772 614 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 MORC3Q14149 939 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 WDR72Q3MJ13 1102 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 ZCWPW2Q504Y3 356 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 ZNF667Q5HYK9 610 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
SS18L1-205ENST00000492466 TOP6BLQ8N6T0 577 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 CXorf38Q8TB03 319 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 FAM200AQ8TCP9 573 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 PLEKHO2Q8TD55 490 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 SEPT5Q99719 369 aaPredicted RBP15.68■□□□□ 0.1
SS18L1-205ENST00000492466 LPIN3Q9BQK8 851 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 FAM126AQ9BYI3 521 aaPredicted RBP15.68■□□□□ 0.1
SS18L1-205ENST00000492466 ATXN3LQ9H3M9 355 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 GDAP2Q9NXN4 497 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 ABI2Q9NYB9 513 aaPredicted RBP15.68■□□□□ 0.1
SS18L1-205ENST00000492466 KIAA1468Q9P260 1216 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 NUP210Q8TEM1 1887 aaPredicted RBP15.67■□□□□ 0.1
SS18L1-205ENST00000492466 SLC16A3O15427 465 aaKnown RBP15.67■□□□□ 0.1
SS18L1-205ENST00000492466 PRAMEF12O95522 483 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 ACAT1P24752 427 aaKnown RBP15.67■□□□□ 0.1
SS18L1-205ENST00000492466 ATICP31939 592 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 LHX1P48742 406 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 TUFMP49411 452 aaKnown RBP15.67■□□□□ 0.1
SS18L1-205ENST00000492466 ANKRD40Q6AI12 368 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 TXNDC11Q6PKC3 985 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 CLEC17AQ6ZS10 378 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 TMEM150AQ86TG1 271 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 TMEM174Q8WUU8 243 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 ZFYVE19Q96K21 471 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 HINFPQ9BQA5 517 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 IER2Q9BTL4 223 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 SMG5Q9UPR3 1016 aaKnown RBP15.67■□□□□ 0.1
SS18L1-205ENST00000492466 MYH10P35580 1976 aa15.67■□□□□ 0.1
SS18L1-205ENST00000492466 MYBPHLA2RUH7 354 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 SLC38A8A6NNN8 435 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 HAPLN1P10915 354 aaPredicted RBP15.66■□□□□ 0.1
SS18L1-205ENST00000492466 TRIM21P19474 475 aaKnown RBP15.66■□□□□ 0.1
SS18L1-205ENST00000492466 GCLMP48507 274 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 MXI1P50539 228 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 STX17P56962 302 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 VEPH1Q14D04 833 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 TAF12Q16514 161 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 TPD52L1Q16890 204 aaPredicted RBP15.66■□□□□ 0.1
SS18L1-205ENST00000492466 MGAT5BQ3V5L5 792 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 GPR158Q5T848 1215 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 SPATA18Q8TC71 538 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 ZNF516Q92618 1163 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 SLC46A2Q9BY10 475 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.66■□□□□ 0.11e-10■■■■■ 287.3
SS18L1-205ENST00000492466 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
SS18L1-205ENST00000492466 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 TMLHEQ9NVH6 421 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 OBP2AQ9NY56 170 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 GTSE1Q9NYZ3 720 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 PCDHB5Q9Y5E4 795 aa15.66■□□□□ 0.1
SS18L1-205ENST00000492466 MED19A0JLT2 244 aaPredicted RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 IKBKBO14920 756 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 FGF19O95750 216 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 HLA-DRAP01903 254 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 HMGA1P17096 107 aaKnown RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 CTHP32929 405 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 PMS1P54277 932 aaKnown RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 CYP4F8P98187 520 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 SATB1Q01826 763 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 SMARCB1Q12824 385 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 PUM1Q14671 1186 aaKnown RBP eCLIP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 NFE2Q16621 373 aaPredicted RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 SOWAHAQ2M3V2 549 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 INTS6LQ5JSJ4 861 aaKnown RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 DPH6Q7L8W6 267 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 SPATA2LQ8IUW3 424 aaPredicted RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 OR6B3Q8NGW1 331 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 SPPL2BQ8TCT7 592 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 CSGALNACT1Q8TDX6 532 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 GIPC2Q8TF65 315 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 C2orf15Q8WU43 125 aaKnown RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 MSANTD3Q96H12 275 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 SYT15Q9BQS2 421 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 GZF1Q9H116 711 aaPredicted RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 TASP1Q9H6P5 420 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 C8orf33Q9H7E9 229 aaPredicted RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 C2orf42Q9NWW7 574 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 ARMCX3Q9UH62 379 aaPredicted RBP15.65■□□□□ 0.1
SS18L1-205ENST00000492466 DACH1Q9UI36 760 aa15.65■□□□□ 0.1
SS18L1-205ENST00000492466 DENND4CQ5VZ89 1909 aa15.64■□□□□ 0.09
SS18L1-205ENST00000492466 SPECC1L-ADORA2AF8WAN1 911 aa15.64■□□□□ 0.09
SS18L1-205ENST00000492466 FGFR1OPO95684 399 aaKnown RBP15.64■□□□□ 0.09
SS18L1-205ENST00000492466 MBD3O95983 291 aa15.64■□□□□ 0.09
SS18L1-205ENST00000492466 CST3P01034 146 aaPredicted RBP15.64■□□□□ 0.09
SS18L1-205ENST00000492466 F11P03951 625 aa15.64■□□□□ 0.09
SS18L1-205ENST00000492466 HOXC13P31276 330 aa15.64■□□□□ 0.09
SS18L1-205ENST00000492466 CCR3P51677 355 aa15.64■□□□□ 0.09
SS18L1-205ENST00000492466 PSMC1P62191 440 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms