RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AFPP02771 609 aaKnown RBP18.44■□□□□ 0.54
MDC1-206ENST00000489540 F11P03951 625 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 SRFP11831 508 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 CD58P19256 250 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 BMP8AQ7Z5Y6 402 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 CREBRFQ8IUR6 639 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 ZSCAN18Q8TBC5 510 aaPredicted RBP18.44■□□□□ 0.54
MDC1-206ENST00000489540 E2F7Q96AV8 911 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 ASIC4Q96FT7 647 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 LRFN3Q9BTN0 628 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 ZNF518BQ9C0D4 1074 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 SMOC2Q9H3U7 446 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 TASP1Q9H6P5 420 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 F8VP50 259 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 TBXAS1P24557 533 aaPredicted RBP18.43■□□□□ 0.54
MDC1-206ENST00000489540 DDX6P26196 483 aaKnown RBP eCLIP18.43■□□□□ 0.54
MDC1-206ENST00000489540 WEE1P30291 646 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 YWHAEP62258 255 aaKnown RBP18.43■□□□□ 0.54
MDC1-206ENST00000489540 CCDC183Q5T5S1 534 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 GPR158Q5T848 1215 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 TANGO2Q6ICL3 276 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 DENND5BQ6ZUT9 1274 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 PAQR9Q6ZVX9 377 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 FAM114A1Q8IWE2 563 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 ST13P5Q8NFI4 369 aaPredicted RBP18.43■□□□□ 0.54
MDC1-206ENST00000489540 WHAMMQ8TF30 809 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 CNOT6LQ96LI5 555 aaKnown RBP18.43■□□□□ 0.54
MDC1-206ENST00000489540 THAP9Q9H5L6 903 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 SLC2A4RGQ9NR83 387 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 CISHQ9NSE2 258 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 WNT16Q9UBV4 365 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 HMGXB4Q9UGU5 601 aa18.43■□□□□ 0.54
MDC1-206ENST00000489540 ORC1Q13415 861 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 CUL2Q13617 745 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 TMEM150AQ86TG1 271 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 FAM35AQ86V20 835 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 FUKQ8N0W3 1084 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 C12orf29Q8N999 325 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 EHBP1Q8NDI1 1231 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 MRPS31Q92665 395 aaKnown RBP18.42■□□□□ 0.54
MDC1-206ENST00000489540 PBXIP1Q96AQ6 731 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 SMARCD1Q96GM5 515 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 NT5C1BQ96P26 610 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 TWNKQ96RR1 684 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 HNRNPABQ99729 332 aaKnown RBP18.42■□□□□ 0.54
MDC1-206ENST00000489540 KXD1Q9BQD3 176 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 FBXL21Q9UKT6 434 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 NOTCH4Q99466 2003 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 DOCK6Q96HP0 2047 aa18.42■□□□□ 0.54
MDC1-206ENST00000489540 NARSO43776 548 aaKnown RBP18.41■□□□□ 0.54
MDC1-206ENST00000489540 FCARP24071 287 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 PPP3CCP48454 512 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 LRMPQ12912 555 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 IRF2BP1Q8IU81 584 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 ARID3BQ8IVW6 561 aaPredicted RBP18.41■□□□□ 0.54
MDC1-206ENST00000489540 STKLD1Q8NE28 680 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 LMO3Q8TAP4 145 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 SLC2A14Q8TDB8 520 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 CYFIP2Q96F07 1278 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 TMEM176AQ96HP8 235 aa18.41■□□□□ 0.54
MDC1-206ENST00000489540 HEXIM2Q96MH2 286 aaKnown RBP18.41■□□□□ 0.54
MDC1-206ENST00000489540 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
MDC1-206ENST00000489540 AP1G2O75843 785 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 CCDC130P13994 396 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 CACNA2D1P54289 1103 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 GPC5P78333 572 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 CYP4F8P98187 520 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 PFKPQ01813 784 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 ZNF394Q53GI3 561 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 STXBP5Q5T5C0 1151 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 HFE2Q6ZVN8 426 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 MON1AQ86VX9 555 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 NUP93Q8N1F7 819 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 ARID3AQ99856 593 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 TTLL2Q9BWV7 592 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 SLC46A2Q9BY10 475 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 PLA2G2FQ9BZM2 168 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 FAM49BQ9NUQ9 324 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 ANO10Q9NW15 660 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 COMMD8Q9NX08 183 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 DOCK8Q8NF50 2099 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 DPYSL4O14531 572 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 RTN3O95197 1032 aaPredicted RBP18.4■□□□□ 0.54
MDC1-206ENST00000489540 CFHP08603 1231 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 FAM200BP0CF97 657 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 PSMC3P17980 439 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 VIPR2P41587 438 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 MTIF2P46199 727 aaKnown RBP18.4■□□□□ 0.54
MDC1-206ENST00000489540 MFSD6LQ8IWD5 586 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 CMTM8Q8IZV2 173 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 ENOX1Q8TC92 643 aaKnown RBP18.4■□□□□ 0.54
MDC1-206ENST00000489540 DEPDC1BQ8WUY9 529 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 KCNK16Q96T55 309 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 TRMT61BQ9BVS5 477 aaKnown RBP18.4■□□□□ 0.54
MDC1-206ENST00000489540 CSNK1G1Q9HCP0 422 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 KRT82Q9NSB4 513 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 TMEM30AQ9NV96 361 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 OBP2AQ9NY56 170 aa18.4■□□□□ 0.54
MDC1-206ENST00000489540 MYO10Q9HD67 2058 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms