RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 NLRP12P59046 1061 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 GUCA2AQ02747 115 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 SSRP1Q08945 709 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 SLC14A1Q13336 389 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 MYBPC2Q14324 1141 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 MTF1Q14872 753 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 VEPH1Q14D04 833 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 EML3Q32P44 896 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 MGAT5BQ3V5L5 792 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 LMBRD2Q68DH5 695 aaPredicted RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 PIK3AP1Q6ZUJ8 805 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 USP37Q86T82 979 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 TRIM22Q8IYM9 498 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 ALLCQ8N6M5 410 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 OSCP1Q8WVF1 389 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 HMGB4Q8WW32 186 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 MRGPRX2Q96LB1 330 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 ACAP3Q96P50 834 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 NACC1Q96RE7 527 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 HNRNPABQ99729 332 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 ACO2Q99798 780 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 OXCT2Q9BYC2 517 aaPredicted RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 KIF9Q9HAQ2 790 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 PCDHA12Q9UN75 941 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 MGAQ8IWI9 3026 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 KNL1Q8NG31 2342 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 TTC24A2A3L6 582 aaPredicted RBP9.96□□□□□ -0.82
SSBP1-212ENST00000489378 PYCARD-AS1I3L0S3 204 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 SGK1O00141 431 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 KLF8O95600 359 aaPredicted RBP9.96□□□□□ -0.82
SSBP1-212ENST00000489378 CYP11B2P19099 503 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 IFNAR2P48551 515 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 AARSP49588 968 aaKnown RBP eCLIP9.96□□□□□ -0.82
SSBP1-212ENST00000489378 EFNA5P52803 228 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 SKOR1P84550 965 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 RPL6Q02878 288 aaKnown RBP9.96□□□□□ -0.82
SSBP1-212ENST00000489378 SPAG1Q07617 926 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 KRT32Q14532 448 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 ZNF77Q15935 545 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 SLC10A6Q3KNW5 377 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 GLRX5Q86SX6 157 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 MON1AQ86VX9 555 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 TXNDC5Q8NBS9 432 aaKnown RBP9.96□□□□□ -0.82
SSBP1-212ENST00000489378 STKLD1Q8NE28 680 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 OR10T2Q8NGX3 314 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 CCDC26Q8TAB7 109 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 ATP2A3Q93084 1043 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 LINC00597Q9H2U6 94 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 ZDHHC4Q9NPG8 344 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 HSFX1Q9UBD0 423 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 ZMYM5Q9UJ78 669 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 PCOLCE2Q9UKZ9 415 aa9.96□□□□□ -0.82
SSBP1-212ENST00000489378 ANK1P16157 1881 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 ATMQ13315 3056 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 FAM149AA5PLN7 773 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 J3QL48 77 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 K7ERI5 159 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 ABLIM1O14639 778 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 DEXIO95424 95 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 SYPP08247 313 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 HARSP12081 509 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 HMGA1P17096 107 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 DDX6P26196 483 aaKnown RBP eCLIP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 TUFMP49411 452 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 GUCY2FP51841 1108 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 MRPS21P82921 87 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 ZNF33AQ06730 810 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 MESP2Q0VG99 397 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 ZNF268Q14587 947 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 PPP2R5AQ15172 486 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 TAF12Q16514 161 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 GAB4Q2WGN9 574 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 SLC39A12Q504Y0 691 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 SEZ6Q53EL9 994 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 CATSPER3Q86XQ3 398 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 EFCAB13Q8IY85 973 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 PGBD3Q8N328 593 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 IL17RCQ8NAC3 791 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 LSM14AQ8ND56 463 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 SLC22A12Q96S37 553 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 NAP1L4Q99733 375 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 TARS2Q9BW92 718 aaKnown RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 TTC12Q9H892 705 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 GJB4Q9NTQ9 266 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 KIAA1522Q9P206 1035 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-212ENST00000489378 CABIN1Q9Y6J0 2220 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 TSC2P49815 1807 aa9.95□□□□□ -0.82
SSBP1-212ENST00000489378 MUC22E2RYF6 1773 aaPredicted RBP9.94□□□□□ -0.82
SSBP1-212ENST00000489378 TCRBV21S2A2A0A5A6 115 aa9.94□□□□□ -0.82
SSBP1-212ENST00000489378 PPEF2O14830 753 aa9.94□□□□□ -0.82
SSBP1-212ENST00000489378 AP5Z1O43299 807 aa9.94□□□□□ -0.82
SSBP1-212ENST00000489378 ADAM23O75077 832 aa9.94□□□□□ -0.82
SSBP1-212ENST00000489378 MED24O75448 989 aa9.94□□□□□ -0.82
SSBP1-212ENST00000489378 ATXN1LP0C7T5 689 aaKnown RBP9.94□□□□□ -0.82
SSBP1-212ENST00000489378 MCF2P10911 925 aa9.94□□□□□ -0.82
SSBP1-212ENST00000489378 TYMPP19971 482 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms