RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ADAM28Q9UKQ2 775 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 ARHGEF37A1IGU5 675 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 NT5C1B-RDH14C9J2C7 533 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 GOLGA8SH3BPF8 625 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 AMHP03971 560 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 ALDH2P05091 517 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 GALTP07902 379 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 SETSIPP0DME0 302 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 TYMPP19971 482 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 COMTP21964 271 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 GABRB2P47870 512 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
COL21A1-211ENST00000488912 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 PCED1BQ96HM7 432 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 MCEEQ96PE7 176 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 TMEM209Q96SK2 561 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 B3GNT5Q9BYG0 378 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 AMFRQ9UKV5 643 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 FAN1Q9Y2M0 1017 aa11.53□□□□□ -0.56
COL21A1-211ENST00000488912 TRAPPC3O43617 180 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 PRLRP16471 622 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 GSCP56915 257 aaPredicted RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 OTOP2Q7RTS6 562 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 FEZF2Q8TBJ5 459 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 MYCBPAPQ8TBZ2 947 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 HES6Q96HZ4 224 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 CAPZA3Q96KX2 299 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 TMEM175Q9BSA9 504 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 MED10Q9BTT4 135 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 CARD6Q9BX69 1037 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 GPR62Q9BZJ7 368 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 IL23AQ9NPF7 189 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 KRT82Q9NSB4 513 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 GEMIN8Q9NWZ8 242 aaKnown RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 PRKAG2Q9UGJ0 569 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 MYO1FO00160 1098 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 GABBR2O75899 941 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 BEST1O76090 585 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 PLCB3Q01970 1234 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 FAM183BPQ6ZVS7 135 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 FAM35AQ86V20 835 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 THEM5Q8N1Q8 247 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 STK32AQ8WU08 396 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 BCL7CQ8WUZ0 217 aaPredicted RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 BADQ92934 168 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 PKMYT1Q99640 499 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 DUSP16Q9BY84 665 aa11.52□□□□□ -0.57
COL21A1-211ENST00000488912 RC3H2Q9HBD1 1191 aaKnown RBP11.52□□□□□ -0.57
COL21A1-211ENST00000488912 TMEM191CA6NGB0 347 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 EFCAB14O75071 495 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 BAIAP3O94812 1187 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 SLU7O95391 586 aaKnown RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 NPR3P17342 541 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 OGDHQ02218 1023 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF268Q14587 947 aaPredicted RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 WHAMMP3Q1A5X7 153 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 DAB2IPQ5VWQ8 1189 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 FAM171BQ6P995 826 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 DCUN1D2Q6PH85 259 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 CLEC20AQ6ZU45 233 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 C7orf61Q8IZ16 206 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 KRT222Q8N1A0 295 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 MYLPFQ96A32 169 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF689Q96CS4 500 aaPredicted RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 MCRS1Q96EZ8 462 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 CWH43Q9H720 699 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 METTL5Q9NRN9 209 aaKnown RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 TMEM30AQ9NV96 361 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 TMLHEQ9NVH6 421 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 SIGLEC16A6NMB1 481 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 KCNK3O14649 394 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 XPO1O14980 1071 aaKnown RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 SYN3O14994 580 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 DDX3YO15523 660 aaKnown RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 SPOPO43791 374 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 OAZ2O95190 189 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 FAM200BP0CF97 657 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 KRT3P12035 628 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms