RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TBXAS1P24557 533 aaPredicted RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 KLRC2P26717 231 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 CLCN4P51793 760 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 CDR1P51861 262 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 NDST1P52848 882 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 POLR2FP61218 127 aaKnown RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 CKAP4Q07065 602 aaKnown RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 RAB33AQ14088 237 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 LRRTM3Q86VH5 581 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 PALB2Q86YC2 1186 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 WHAMMQ8TF30 809 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 RPGRIP1Q96KN7 1286 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 TWNKQ96RR1 684 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 OXCT2Q9BYC2 517 aaPredicted RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 ZCWPW1Q9H0M4 648 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 UBE2TQ9NPD8 197 aaPredicted RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 NLRC4Q9NPP4 1024 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 MTCL1Q9Y4B5 1905 aaKnown RBP20.55■□□□□ 0.88
CCM2-216ENST00000488727 MYH10P35580 1976 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 A8MXQ7 604 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 CILPO75339 1184 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 CPB1P15086 417 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 MAGEA1P43355 309 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 PSMC1P62191 440 aaKnown RBP20.55■□□□□ 0.88
CCM2-216ENST00000488727 ORC1Q13415 861 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 INTS6LQ5JSJ4 861 aaKnown RBP20.55■□□□□ 0.88
CCM2-216ENST00000488727 HNRNPLLQ8WVV9 542 aaKnown RBP20.55■□□□□ 0.88
CCM2-216ENST00000488727 PKMYT1Q99640 499 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 LPIN3Q9BQK8 851 aa20.55■□□□□ 0.88
CCM2-216ENST00000488727 BARX2Q9UMQ3 279 aaPredicted RBP20.55■□□□□ 0.88
CCM2-216ENST00000488727 TGM5O43548 720 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 ACO1P21399 889 aaKnown RBP20.54■□□□□ 0.88
CCM2-216ENST00000488727 PCSK1P29120 753 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 KCNC3Q14003 757 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 KLHDC7AQ5VTJ3 777 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 VN1R2Q8NFZ6 395 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 SLC22A17Q8WUG5 538 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 PPP2R3CQ969Q6 453 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 SYT15Q9BQS2 421 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 IGFLR1Q9H665 355 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 LUC7LQ9NQ29 371 aaKnown RBP20.54■□□□□ 0.88
CCM2-216ENST00000488727 CRTAC1Q9NQ79 661 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 TMLHEQ9NVH6 421 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 JRKLQ9Y4A0 524 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 HCFC2Q9Y5Z7 792 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 DUSP10Q9Y6W6 482 aa20.54■□□□□ 0.88
CCM2-216ENST00000488727 ENC1O14682 589 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 ABLIM3O94929 683 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 VNN2O95498 520 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 EPCAMP16422 314 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 GPR17Q13304 367 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 TDRD12Q587J7 1177 aaKnown RBP20.53■□□□□ 0.88
CCM2-216ENST00000488727 LILRA6Q6PI73 481 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 RNF19BQ6ZMZ0 732 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 UNC93AQ86WB7 457 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 RNF10Q8N5U6 811 aaKnown RBP20.53■□□□□ 0.88
CCM2-216ENST00000488727 ZNF461Q8TAF7 563 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 ELOVL4Q9GZR5 314 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 ARFGAP3Q9NP61 516 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 CDH9Q9ULB4 789 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 MACROD2A1Z1Q3 448 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 MYBPHLA2RUH7 354 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 LINC01565O15544 149 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 GLUD1P00367 558 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 SPATA31D3P0C874 917 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 UCHL3P15374 230 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 PRLRP16471 622 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 TSPY1Q01534 308 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 SLC39A12Q504Y0 691 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 ZNF394Q53GI3 561 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 IQCEQ6IPM2 695 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 SPATA31D4Q6ZUB0 917 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 PGLYRP2Q96PD5 576 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 ALS2CR12Q96Q35 445 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 CDCA3Q99618 268 aaPredicted RBP20.53■□□□□ 0.88
CCM2-216ENST00000488727 FAM124BQ9H5Z6 455 aaPredicted RBP20.53■□□□□ 0.88
CCM2-216ENST00000488727 DNAJC12Q9UKB3 198 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 GTF3C4Q9UKN8 822 aa20.53■□□□□ 0.88
CCM2-216ENST00000488727 PTPRDP23468 1912 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 ATP8B3O60423 1300 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 GLP2RO95838 553 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 CCDC85BQ15834 202 aaPredicted RBP20.52■□□□□ 0.88
CCM2-216ENST00000488727 ASIC2Q16515 512 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 ARHGAP44Q17R89 818 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 LLGL2Q6P1M3 1020 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 FAM171BQ6P995 826 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 ACOT1Q86TX2 421 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 CAPN6Q9Y6Q1 641 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 PRUNE2Q8WUY3 3088 aa20.52■□□□□ 0.88
CCM2-216ENST00000488727 MTMR11A4FU01 709 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 PTPN1P18031 435 aaKnown RBP20.51■□□□□ 0.87
CCM2-216ENST00000488727 ANXA13P27216 316 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 RAD23BP54727 409 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 MFAP3P55082 362 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 GFPT1Q06210 699 aaPredicted RBP20.51■□□□□ 0.87
CCM2-216ENST00000488727 RAPGEF1Q13905 1077 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 SLC18A3Q16572 532 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 TPGS2Q68CL5 300 aa20.51■□□□□ 0.87
CCM2-216ENST00000488727 DCP1BQ8IZD4 617 aaKnown RBP20.51■□□□□ 0.87
CCM2-216ENST00000488727 CRYBG2Q8N1P7 616 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms