RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 ORC1Q13415 861 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 CCDC40Q4G0X9 1142 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 UNC93AQ86WB7 457 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 FBXL6Q8N531 539 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 TNIP3Q96KP6 325 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 SPATA17Q96L03 361 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 GCNAQ96QF7 691 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 ZNF518BQ9C0D4 1074 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 ELOVL4Q9GZR5 314 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 TRPV4Q9HBA0 871 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 ZFP14Q9HCL3 533 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 RAB20Q9NX57 234 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 RAPGEFL1Q9UHV5 662 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
HMG20B-212ENST00000487894 COQ4Q9Y3A0 265 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 CLDN5O00501 218 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 NLRP12P59046 1061 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 GPC5P78333 572 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 ARHGAP15Q53QZ3 475 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 GPR158Q5T848 1215 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 ACOT1Q86TX2 421 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 FAM35AQ86V20 835 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 CCDC150Q8NCX0 1101 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 GPT2Q8TD30 523 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 MYRFLQ96LU7 910 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 CEP295NLQ96MC4 621 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 MED15Q96RN5 788 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 TWNKQ96RR1 684 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 CYP3A43Q9HB55 503 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 WNT16Q9UBV4 365 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 FBXL21Q9UKT6 434 aa18.14■□□□□ 0.49
HMG20B-212ENST00000487894 KRBA1A5PL33 1030 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 F8VP50 259 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 TRIM66O15016 1216 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 GRIK1P39086 918 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 VIPR2P41587 438 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 FMO5P49326 533 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 MARSP56192 900 aaKnown RBP18.13■□□□□ 0.49
HMG20B-212ENST00000487894 VITQ6UXI7 678 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 PAQR9Q6ZVX9 377 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 SIX5Q8N196 739 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 CRYBG2Q8N1P7 616 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 RSPRY1Q96DX4 576 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 FAXDC2Q96IV6 333 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 C8orf48Q96LL4 319 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 TASP1Q9H6P5 420 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 UXTQ9UBK9 157 aaPredicted RBP18.13■□□□□ 0.49
HMG20B-212ENST00000487894 RWDD2AQ9UIY3 292 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 CA14Q9ULX7 337 aa18.13■□□□□ 0.49
HMG20B-212ENST00000487894 CILPO75339 1184 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 PRAMEF12O95522 483 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 CD58P19256 250 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 ANXA13P27216 316 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 USP46P62068 366 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 GRM2Q14416 872 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 IER5LQ5T953 404 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 CWF19L1Q69YN2 538 aaKnown RBP18.12■□□□□ 0.49
HMG20B-212ENST00000487894 ARID3BQ8IVW6 561 aaPredicted RBP18.12■□□□□ 0.49
HMG20B-212ENST00000487894 TRIM59Q8IWR1 403 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
HMG20B-212ENST00000487894 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 WHAMMQ8TF30 809 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 ARID3AQ99856 593 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 SRRTQ9BXP5 876 aaKnown RBP18.12■□□□□ 0.49
HMG20B-212ENST00000487894 ATP8B3O60423 1300 aa18.12■□□□□ 0.49
HMG20B-212ENST00000487894 HEPACAM2A8MVW5 462 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 GNA14O95837 355 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 CCDC130P13994 396 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 NPR3P17342 541 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 WEE1P30291 646 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 VCPP55072 806 aaKnown RBP18.11■□□□□ 0.49
HMG20B-212ENST00000487894 DPCR1Q3MIW9 517 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 DENND5BQ6ZUT9 1274 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 C12orf29Q8N999 325 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 MLKLQ8NB16 471 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 DEPDC1BQ8WUY9 529 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 TATDN2Q93075 761 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 SMARCD1Q96GM5 515 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 MED10Q9BTT4 135 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 TTLL2Q9BWV7 592 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 SLC46A2Q9BY10 475 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 MFSD1Q9H3U5 465 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 ARHGEF3Q9NR81 526 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 FAM49BQ9NUQ9 324 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 MUC6Q6W4X9 2439 aa18.11■□□□□ 0.49
HMG20B-212ENST00000487894 GOLGA6L22H0YM25 854 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 PMM2O15305 246 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 PSMC3P17980 439 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 DDX6P26196 483 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■■■□ 21.2
HMG20B-212ENST00000487894 WDR44Q5JSH3 913 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 TXNDC8Q6A555 127 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 GPIHBP1Q8IV16 184 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 MFSD6LQ8IWD5 586 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 SLC2A14Q8TDB8 520 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 MRPS31Q92665 395 aaKnown RBP18.1■□□□□ 0.49
HMG20B-212ENST00000487894 E2F7Q96AV8 911 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 KRT82Q9NSB4 513 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 CISHQ9NSE2 258 aa18.1■□□□□ 0.49
HMG20B-212ENST00000487894 ZMYM5Q9UJ78 669 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms