RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PSMC2P35998 433 aaKnown RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 AVPR1AP37288 418 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 PRCPP42785 496 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 RAP1GAPP47736 663 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 GCLMP48507 274 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 MLLT6P55198 1093 aaPredicted RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 ENPEPQ07075 957 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 PPP3CAQ08209 521 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 FZD5Q13467 585 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 ARHGAP29Q52LW3 1261 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 CELF5Q8N6W0 485 aaKnown RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 SPATA20Q8TB22 786 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 TAF4BQ92750 862 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 ERCC4Q92889 916 aaPredicted RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 USP13Q92995 863 aaPredicted RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 CLDN23Q96B33 292 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 ZFYVE19Q96K21 471 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 GSDMAQ96QA5 445 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 BCO2Q9BYV7 579 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 SDCBP2Q9H190 292 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 MRPS17Q9Y2R5 130 aaKnown RBP12.21□□□□□ -0.45
SPEN-205ENST00000487496 PCDHA5Q9Y5H7 936 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 PIAS3Q9Y6X2 628 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 F5P12259 2224 aa12.21□□□□□ -0.46
SPEN-205ENST00000487496 PROB1E7EW31 1015 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 F8VP50 259 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 NCAM2O15394 837 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 SMC2O95347 1197 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 ASS1P00966 412 aaKnown RBP12.2□□□□□ -0.46
SPEN-205ENST00000487496 HLA-DRAP01903 254 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 TRIM49P0CI25 452 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 TRIM49CP0CI26 452 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 P4HA1P13674 534 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 NBL1P41271 181 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
SPEN-205ENST00000487496 USP46P62068 366 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 DENND5BQ6ZUT9 1274 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 CSGALNACT1Q8TDX6 532 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 SMARCE1Q969G3 411 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 C8orf48Q96LL4 319 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 B3GNT5Q9BYG0 378 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 ZNF518BQ9C0D4 1074 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 ELOVL4Q9GZR5 314 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 TDP1Q9NUW8 608 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 TMEM30AQ9NV96 361 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 HOOK1Q9UJC3 728 aaKnown RBP12.2□□□□□ -0.46
SPEN-205ENST00000487496 NDRG2Q9UN36 371 aaKnown RBP12.2□□□□□ -0.46
SPEN-205ENST00000487496 CCL26Q9Y258 94 aa12.2□□□□□ -0.46
SPEN-205ENST00000487496 CLDN5O00501 218 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 TRIM66O15016 1216 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 CCNE1P24864 410 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 ANXA13P27216 316 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 PIK3CAP42336 1068 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 MAGEA9P43362 315 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 ASPAP45381 313 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 RPS9P46781 194 aaKnown RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 SOX9P48436 509 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 CACNA2D1P54289 1103 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 COBLL1Q53SF7 1204 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 FRMD5Q7Z6J6 570 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 ELOA2Q8IYF1 753 aaPredicted RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 MAML2Q8IZL2 1156 aaPredicted RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 TTC8Q8TAM2 541 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 TAS1R2Q8TE23 839 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 FAM3CQ92520 227 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 TNIP3Q96KP6 325 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 SLC22A12Q96S37 553 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 CYP2S1Q96SQ9 504 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 TTLL2Q9BWV7 592 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 C8orf33Q9H7E9 229 aaPredicted RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 MMRN2Q9H8L6 949 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 KIF9Q9HAQ2 790 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 TRPC7Q9HCX4 862 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 SPATA6Q9NWH7 488 aaPredicted RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 THG1LQ9NWX6 298 aaKnown RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 GTSE1Q9NYZ3 720 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 EHD2Q9NZN4 543 aa12.19□□□□□ -0.46
SPEN-205ENST00000487496 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
SPEN-205ENST00000487496 COL4A2P08572 1712 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 TRAV19A0A0A6YYK7 116 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 CETN3O15182 167 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 GTF2H1P32780 548 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 KPNA1P52294 538 aaPredicted RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 PMS1P54277 932 aaKnown RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 NOP14P78316 857 aaKnown RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 TNK2Q07912 1038 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 ZNF268Q14587 947 aaPredicted RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms