RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 WLSQ5T9L3 541 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 C9orf131Q5VYM1 1079 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 RGS9BPQ6ZS82 235 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 NT5DC4Q86YG4 428 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TACO1Q9BSH4 297 aaKnown RBP27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TBK1Q9UHD2 729 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 AKT3Q9Y243 479 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 LRRD1A4D1F6 860 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 CILPO75339 1184 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 ITGB3P05106 788 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 RDXP35241 583 aaKnown RBP27.42■■□□□ 1.98
HLA-C-208ENST00000487245 RAP1GAPP47736 663 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 NCALDP61601 193 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TMED2Q15363 201 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TAZQ16635 292 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 CYP4F22Q6NT55 531 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 ZNF467Q7Z7K2 595 aaPredicted RBP27.42■■□□□ 1.98
HLA-C-208ENST00000487245 PCGF5Q86SE9 256 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TTC13Q8NBP0 860 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 SLC4A11Q8NBS3 891 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 GDAP1Q8TB36 358 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 DENND1AQ8TEH3 1009 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 SLC10A4Q96EP9 437 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TMEM176AQ96HP8 235 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 FETUBQ9UGM5 382 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 SLC24A2Q9UI40 661 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 UNCXA6NJT0 531 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 C3orf70A6NLC5 250 aaPredicted RBP27.41■■□□□ 1.98
HLA-C-208ENST00000487245 GOLGA8SH3BPF8 625 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 VDRP11473 427 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 RFC1P35251 1148 aaPredicted RBP27.41■■□□□ 1.98
HLA-C-208ENST00000487245 CCDC15Q0P6D6 951 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 FAM133BQ5BKY9 247 aaKnown RBP27.41■■□□□ 1.98
HLA-C-208ENST00000487245 ZBTB10Q96DT7 871 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 SDCBP2Q9H190 292 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 SYNCQ9H7C4 482 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 RXFP1Q9HBX9 757 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 SMG5Q9UPR3 1016 aaKnown RBP27.41■■□□□ 1.98
HLA-C-208ENST00000487245 SLC45A1Q9Y2W3 748 aa27.41■■□□□ 1.98
HLA-C-208ENST00000487245 ASMTLO95671 621 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 STAU1O95793 577 aaKnown RBP27.4■■□□□ 1.98
HLA-C-208ENST00000487245 ZSCAN5DPP0CG00 497 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 SLC8A1P32418 973 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 GJA5P36382 358 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 GABRB2P47870 512 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 CDH8P55286 799 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 CGB2Q6NT52 195 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 CENPUQ71F23 418 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 CXorf38Q8TB03 319 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 PRCCQ92733 491 aaPredicted RBP27.4■■□□□ 1.98
HLA-C-208ENST00000487245 ITGA11Q9UKX5 1188 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 KIAA1257Q9ULG3 409 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 AGAP1Q9UPQ3 857 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 STRNO43815 780 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 HMGCRP04035 888 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 WDR4P57081 412 aaKnown RBP27.4■■□□□ 1.98
HLA-C-208ENST00000487245 TMEM132DQ14C87 1099 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 TXNRD3NBQ6F5E7 133 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 XYLT1Q86Y38 959 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 MLXIPLQ9NP71 852 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 CYTH4Q9UIA0 394 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 C2CD2Q9Y426 696 aa27.4■■□□□ 1.98
HLA-C-208ENST00000487245 FARP1Q9Y4F1 1045 aaPredicted RBP27.4■■□□□ 1.98
HLA-C-208ENST00000487245 MGAMO43451 1857 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 ATP6V1G2O95670 118 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 SLC25A11Q02978 314 aaKnown RBP27.39■■□□□ 1.98
HLA-C-208ENST00000487245 SLC10A6Q3KNW5 377 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 MAMDC4Q6UXC1 1216 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 RPAINQ86UA6 219 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 ELOVL4Q9GZR5 314 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 MIS12Q9H081 205 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 SMYD3Q9H7B4 428 aa27.39■■□□□ 1.98
HLA-C-208ENST00000487245 SSU72Q9NP77 194 aaKnown RBP27.39■■□□□ 1.98
HLA-C-208ENST00000487245 ETS1P14921 441 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 ARF4P18085 180 aaPredicted RBP27.38■■□□□ 1.97
HLA-C-208ENST00000487245 ADORA2AP29274 412 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 FOXN2P32314 431 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 RBP5P82980 135 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 MTHFD1LQ6UB35 978 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 AFG1LQ8WV93 481 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 HPDLQ96IR7 371 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.38■■□□□ 1.97
HLA-C-208ENST00000487245 MICAL2O94851 1124 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 CYP2C8P10632 490 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 NQO1P15559 274 aaKnown RBP27.38■■□□□ 1.97
HLA-C-208ENST00000487245 SKIV2L2P42285 1042 aaKnown RBP27.38■■□□□ 1.97
HLA-C-208ENST00000487245 BBS12Q6ZW61 710 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 JOSD2Q8TAC2 188 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 MCRS1Q96EZ8 462 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 ACAP3Q96P50 834 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 CPXM1Q96SM3 734 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 ADPGKQ9BRR6 497 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 TRABDQ9H4I3 376 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 ECT2Q9H8V3 914 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 STARD13Q9Y3M8 1113 aa27.38■■□□□ 1.97
HLA-C-208ENST00000487245 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.38■■□□□ 1.97
HLA-C-208ENST00000487245 SMAPO00193 183 aa27.37■■□□□ 1.97
HLA-C-208ENST00000487245 LRCH4O75427 683 aa27.37■■□□□ 1.97
HLA-C-208ENST00000487245 SF3A3Q12874 501 aaKnown RBP eCLIP27.37■■□□□ 1.97
HLA-C-208ENST00000487245 EFHC2Q5JST6 749 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms