RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TOM1L1O75674 476 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CCNFP41002 786 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 SLC1A1P43005 524 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 AQP5P55064 265 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CUL2Q13617 745 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CHI3L2Q15782 390 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 EGFL6Q8IUX8 553 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 BBOF1Q8ND07 529 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 EXD1Q8NHP7 514 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CHURC1Q8WUH1 139 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 POLR3FQ9H1D9 316 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-211ENST00000486901 FBXO40Q9UH90 709 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 PRR5-ARHGAP8B1AHC4 643 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 ALOX15BO15296 676 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CDH8P55286 799 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 ARHGAP8P85298 464 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 RALGPS1Q5JS13 557 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 WASHC2DQ5SRD0 308 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CES4AQ5XG92 561 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
HSPG2-211ENST00000486901 OR52E8Q6IFG1 317 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 RIPOR1Q6ZS17 1223 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 RGS9BPQ6ZS82 235 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 OGFOD1Q8N543 542 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 OXNAD1Q96HP4 312 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-211ENST00000486901 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 UBE4BO95155 1302 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 PRPF4O43172 522 aaKnown RBP eCLIP12.96□□□□□ -0.34
HSPG2-211ENST00000486901 OR6B1O95007 311 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 POTEJP0CG39 1038 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 CRADDP78560 199 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 DACT2Q5SW24 774 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 KATNAL2Q8IYT4 538 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.34
HSPG2-211ENST00000486901 PPP1R14CQ8TAE6 165 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 SLC26A7Q8TE54 656 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 NMD3Q96D46 503 aaKnown RBP12.96□□□□□ -0.34
HSPG2-211ENST00000486901 ATXN7L3BQ96GX2 97 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 MRPL47Q9HD33 250 aaKnown RBP12.96□□□□□ -0.34
HSPG2-211ENST00000486901 ETAA1Q9NY74 926 aa12.96□□□□□ -0.34
HSPG2-211ENST00000486901 A6NJR5 290 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TCEA3O75764 348 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 PGM3O95394 542 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 MUTP22033 750 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 SYDE1Q6ZW31 735 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TAS1R3Q7RTX0 852 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 KIAA0319LQ8IZA0 1049 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 DNAJC1Q96KC8 554 aaKnown RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 SLC9A2Q9UBY0 812 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 ATP8B3O60423 1300 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TCRBV9S1A1TA0A576 114 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 CYP1A1P04798 512 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 RBP3P10745 1247 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 ACADSP16219 412 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TFAMQ00059 246 aaKnown RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 BST1Q10588 318 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TCHHL1Q5QJ38 904 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 RAPH1Q70E73 1250 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 ATP11CQ8NB49 1132 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TFAP2BQ92481 460 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 FAM136AQ96C01 138 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 RIT2Q99578 217 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 MTMR12Q9C0I1 747 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 EBF3Q9H4W6 596 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 PARVAQ9NVD7 372 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 LRCH1Q9Y2L9 728 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 COL14A1Q05707 1796 aaKnown RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 hCG_1818297A0A087WSY0 165 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 H7C0C1 242 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 COPEO14579 308 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 WFS1O76024 890 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 GSTT1P30711 240 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 ATP5OP48047 213 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 MYL6P60660 151 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 TFDP3Q5H9I0 405 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 VWA5B1Q5TIE3 1220 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 DENND5BQ6ZUT9 1274 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 PDIK1LQ8N165 341 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
HSPG2-211ENST00000486901 PTCD3Q96EY7 689 aaKnown RBP12.95□□□□□ -0.34
HSPG2-211ENST00000486901 RIPK3Q9Y572 518 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms