RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 DNAI2Q9GZS0 605 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 FAM124BQ9H5Z6 455 aaPredicted RBP19.36■□□□□ 0.69
COL1A1-207ENST00000486572 UXTQ9UBK9 157 aaPredicted RBP19.36■□□□□ 0.69
COL1A1-207ENST00000486572 TECTAO75443 2155 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 F8VP50 259 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 CLDN5O00501 218 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 NARSO43776 548 aaKnown RBP19.35■□□□□ 0.69
COL1A1-207ENST00000486572 ECI2O75521 394 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 SRFP11831 508 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 FCARP24071 287 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 KCNH2Q12809 1159 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 TPD52L1Q16890 204 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-207ENST00000486572 STXBP5Q5T5C0 1151 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 ZSCAN18Q8TBC5 510 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-207ENST00000486572 TATDN2Q93075 761 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 ELSPBP1Q96BH3 223 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 ASIC4Q96FT7 647 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 TWNKQ96RR1 684 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 ARID3AQ99856 593 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 LRFN3Q9BTN0 628 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 ZFP14Q9HCL3 533 aa19.35■□□□□ 0.69
COL1A1-207ENST00000486572 AFPP02771 609 aaKnown RBP19.34■□□□□ 0.69
COL1A1-207ENST00000486572 F11P03951 625 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 CACNA2D1P54289 1103 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 CYP4F8P98187 520 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 CUL2Q13617 745 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 CT47A1Q5JQC4 288 aaPredicted RBP19.34■□□□□ 0.69
COL1A1-207ENST00000486572 CCDC183Q5T5S1 534 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 GPR158Q5T848 1215 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 DENND5BQ6ZUT9 1274 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 TMEM150AQ86TG1 271 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 FUKQ8N0W3 1084 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 WHAMMQ8TF30 809 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 SMARCD1Q96GM5 515 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 TRPV4Q9HBA0 871 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 KRT82Q9NSB4 513 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 CISHQ9NSE2 258 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 FAM49BQ9NUQ9 324 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 TMEM30AQ9NV96 361 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 EHD2Q9NZN4 543 aa19.34■□□□□ 0.69
COL1A1-207ENST00000486572 TRIOO75962 3097 aa19.33■□□□□ 0.69
COL1A1-207ENST00000486572 CCDC130P13994 396 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 LRMPQ12912 555 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 TANGO2Q6ICL3 276 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 PAQR9Q6ZVX9 377 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 IRF2BP1Q8IU81 584 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 CREBRFQ8IUR6 639 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 C12orf29Q8N999 325 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 SLC2A14Q8TDB8 520 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 THAP9Q9H5L6 903 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 TASP1Q9H6P5 420 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 DMAP1Q9NPF5 467 aaPredicted RBP19.33■□□□□ 0.68
COL1A1-207ENST00000486572 ZMYM5Q9UJ78 669 aa19.33■□□□□ 0.68
COL1A1-207ENST00000486572 CFHP08603 1231 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 TBXAS1P24557 533 aaPredicted RBP19.32■□□□□ 0.68
COL1A1-207ENST00000486572 DDX6P26196 483 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL1A1-207ENST00000486572 YWHAEP62258 255 aaKnown RBP19.32■□□□□ 0.68
COL1A1-207ENST00000486572 HFE2Q6ZVN8 426 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 BMP8AQ7Z5Y6 402 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 FAM114A1Q8IWE2 563 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 MRPS31Q92665 395 aaKnown RBP19.32■□□□□ 0.68
COL1A1-207ENST00000486572 NT5C1BQ96P26 610 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 SLC2A4RGQ9NR83 387 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 FBXL21Q9UKT6 434 aa19.32■□□□□ 0.68
COL1A1-207ENST00000486572 OBSL1O75147 1896 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 TADA3O75528 432 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 AP1G2O75843 785 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 USP46P62068 366 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 ZNF394Q53GI3 561 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 SASS6Q6UVJ0 657 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 ARID3BQ8IVW6 561 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-207ENST00000486572 LMO3Q8TAP4 145 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 PBXIP1Q96AQ6 731 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 E2F7Q96AV8 911 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 CYFIP2Q96F07 1278 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 KCNK16Q96T55 309 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 HNRNPABQ99729 332 aaKnown RBP19.31■□□□□ 0.68
COL1A1-207ENST00000486572 TTLL2Q9BWV7 592 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 PLA2G2FQ9BZM2 168 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 WNT16Q9UBV4 365 aa19.31■□□□□ 0.68
COL1A1-207ENST00000486572 NUP210Q8TEM1 1887 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-207ENST00000486572 GREB1Q4ZG55 1949 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 SOBPA7XYQ1 873 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 FAM200BP0CF97 657 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 ADORA2BP29275 332 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 WEE1P30291 646 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 VIPR2P41587 438 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 MTIF2P46199 727 aaKnown RBP19.3■□□□□ 0.68
COL1A1-207ENST00000486572 RAD23BP54727 409 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 GPC5P78333 572 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 VITQ6UXI7 678 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 PPM1KQ8N3J5 372 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 SLC4A11Q8NBS3 891 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 EHBP1Q8NDI1 1231 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 DEPDC1BQ8WUY9 529 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 TMEM176AQ96HP8 235 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 SLC46A2Q9BY10 475 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 CSNK1G1Q9HCP0 422 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 GCNT4Q9P109 453 aa19.3■□□□□ 0.68
COL1A1-207ENST00000486572 RTN3O95197 1032 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms