RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 FUKQ8N0W3 1084 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 SLC4A11Q8NBS3 891 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 JAKMIP2Q96AA8 810 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 ACSF2Q96CM8 615 aaPredicted RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 TCEAL4Q96EI5 215 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 TMEM176AQ96HP8 235 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 KREMEN1Q96MU8 473 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 MYADMQ96S97 322 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 LSM14BQ9BX40 385 aaKnown RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 APEX2Q9UBZ4 518 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 LIMA1Q9UHB6 759 aaKnown RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 DOCK8Q8NF50 2099 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 SLC38A8A6NNN8 435 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 LOC730098B7Z3J9 87 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 NRG2O14511 850 aaPredicted RBP12.57□□□□□ -0.4
HPS4-214ENST00000485842 ZNF197O14709 1029 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 CSH1P0DML2 217 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 CSH2P0DML3 217 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 KRT5P13647 590 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
HPS4-214ENST00000485842 CCR2P41597 374 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 MFAP3P55082 362 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 TPM4P67936 248 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 ARHGAP44Q17R89 818 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 PAQR9Q6ZVX9 377 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 GJD3Q8N144 294 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 LEMD2Q8NC56 503 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 RBBP8NLQ8NC74 664 aaPredicted RBP12.57□□□□□ -0.4
HPS4-214ENST00000485842 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 GCNAQ96QF7 691 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 FAM124BQ9H5Z6 455 aaPredicted RBP12.57□□□□□ -0.4
HPS4-214ENST00000485842 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
HPS4-214ENST00000485842 TMEM30AQ9NV96 361 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 USTQ9Y2C2 406 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
HPS4-214ENST00000485842 XIRP2A4UGR9 3374 aa12.57□□□□□ -0.4
HPS4-214ENST00000485842 A0A1W2PRU2 124 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 GOLGA6L19H0YKK7 550 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 CAVIN2O95810 425 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 GABRR2P28476 465 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 USP8P40818 1118 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 EPHA5P54756 1037 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 CYP4F8P98187 520 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 KCNMA1Q12791 1236 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 TEAD2Q15562 447 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 SGO2Q562F6 1265 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 PRSS36Q5K4E3 855 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 LRSAM1Q6UWE0 723 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 ENOSF1Q7L5Y1 443 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 NPAS3Q8IXF0 933 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 SHKBP1Q8TBC3 707 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 FGF13Q92913 245 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 MCRS1Q96EZ8 462 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 C8orf48Q96LL4 319 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 SMOQ99835 787 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 LRRC3Q9BY71 257 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 ATXN3LQ9H3M9 355 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 SLITRK6Q9H5Y7 841 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 CD320Q9NPF0 282 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 AVENQ9NQS1 362 aaPredicted RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.4
HPS4-214ENST00000485842 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 AJAP1Q9UKB5 411 aaPredicted RBP12.56□□□□□ -0.4
HPS4-214ENST00000485842 CDH7Q9ULB5 785 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 GREB1Q4ZG55 1949 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 UNC80Q8N2C7 3258 aa12.56□□□□□ -0.4
HPS4-214ENST00000485842 PATJQ8NI35 1801 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 OBSL1O75147 1896 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 MYO16Q9Y6X6 1858 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 RNF225M0QZC1 329 aaPredicted RBP12.55□□□□□ -0.4
HPS4-214ENST00000485842 NOL4O94818 638 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 FGF19O95750 216 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 CALCAP01258 141 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 LAMP2P13473 410 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 HMGA1P17096 107 aaKnown RBP12.55□□□□□ -0.4
HPS4-214ENST00000485842 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
HPS4-214ENST00000485842 CDC25CP30307 473 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 KLK7P49862 253 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 MAP3K7CLP57077 242 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 UBXN1Q04323 297 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 RAPGEF1Q13905 1077 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms