RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-205ENST00000485746 TTI2Q6NXR4 508 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 DENND5BQ6ZUT9 1274 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 DEPDC1BQ8WUY9 529 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 SPATA17Q96L03 361 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 DUSP9Q99956 384 aaKnown RBP13.31□□□□□ -0.28
PTCD1-205ENST00000485746 NT5C1AQ9BXI3 368 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 ZNF518BQ9C0D4 1074 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
PTCD1-205ENST00000485746 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 LMBRD1Q9NUN5 540 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 DENND4AQ7Z401 1863 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 AP1G2O75843 785 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 ABL1P00519 1130 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 F11P03951 625 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
PTCD1-205ENST00000485746 ADORA2BP29275 332 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 AVPR2P30518 371 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 ASPAP45381 313 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 YWHAEP62258 255 aaKnown RBP13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CBWD6Q4V339 395 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CBWD3Q5JTY5 395 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CBWD5Q5RIA9 395 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 POTEHQ6S545 545 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 VITQ6UXI7 678 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CLEC17AQ6ZS10 378 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 MFSD6LQ8IWD5 586 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 TTC39CQ8N584 583 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 MLKLQ8NB16 471 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CSGALNACT1Q8TDX6 532 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 IRF7Q92985 503 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 C8orf48Q96LL4 319 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CEP295NLQ96MC4 621 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 HEXIM2Q96MH2 286 aaKnown RBP13.3□□□□□ -0.28
PTCD1-205ENST00000485746 BCO2Q9BYV7 579 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 TRPV4Q9HBA0 871 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 IL21Q9HBE4 155 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 THG1LQ9NWX6 298 aaKnown RBP13.3□□□□□ -0.28
PTCD1-205ENST00000485746 TRPM5Q9NZQ8 1165 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 DACH1Q9UI36 760 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 CUL9Q8IWT3 2517 aa13.3□□□□□ -0.28
PTCD1-205ENST00000485746 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 CCDC130P13994 396 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 FCARP24071 287 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 CLCN5P51795 746 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 VCPP55072 806 aaKnown RBP13.29□□□□□ -0.28
PTCD1-205ENST00000485746 LRMPQ12912 555 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-205ENST00000485746 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 FAM35AQ86V20 835 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 CMTM8Q8IZV2 173 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 CRYBG2Q8N1P7 616 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 SLC2A14Q8TDB8 520 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 TATDN2Q93075 761 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
PTCD1-205ENST00000485746 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 TBC1D17Q9HA65 648 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 KRT82Q9NSB4 513 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 FAM49BQ9NUQ9 324 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 RWDD2AQ9UIY3 292 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCD1-205ENST00000485746 TSC2P49815 1807 aa13.29□□□□□ -0.28
PTCD1-205ENST00000485746 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 LRRN2O75325 713 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 RTN3O95197 1032 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-205ENST00000485746 FAM200BP0CF97 657 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 FMO5P49326 533 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 PDE6CP51160 858 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 MAP3K7CLP57077 242 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 PRKCQQ04759 706 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 CC2D1AQ6P1N0 951 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-205ENST00000485746 FOXR2Q6PJQ5 311 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 NUP93Q8N1F7 819 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 CELF5Q8N6W0 485 aaKnown RBP13.28□□□□□ -0.28
PTCD1-205ENST00000485746 C12orf29Q8N999 325 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 FBXO32Q969P5 355 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 SLC35C1Q96A29 364 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 CYFIP2Q96F07 1278 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 FAXDC2Q96IV6 333 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 SLITRK1Q96PX8 696 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 PRRX2Q99811 253 aa13.28□□□□□ -0.28
PTCD1-205ENST00000485746 SMG9Q9H0W8 520 aaKnown RBP13.28□□□□□ -0.28
PTCD1-205ENST00000485746 DMAP1Q9NPF5 467 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-205ENST00000485746 SOBPA7XYQ1 873 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 CILPO75339 1184 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
PTCD1-205ENST00000485746 CKMP06732 381 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 YWHAQP27348 245 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms