RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SGSM1Q2NKQ1 1148 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 DCAF17Q5H9S7 520 aaPredicted RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 TXNDC8Q6A555 127 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 ACOT1Q86TX2 421 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 MFSD6LQ8IWD5 586 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 YAF2Q8IY57 180 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 TTC8Q8TAM2 541 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 ZFYVE19Q96K21 471 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 LRRC3BQ96PB8 259 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 B3GNT5Q9BYG0 378 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 TRPC7Q9HCX4 862 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 TMEM30AQ9NV96 361 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 ARIH1Q9Y4X5 557 aaPredicted RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 ZNF263O14978 683 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 P4HA1P13674 534 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 BMP6P22004 513 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 MXI1P50539 228 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 PTPN5P54829 565 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 STARD6P59095 220 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 USP46P62068 366 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 NOP14P78316 857 aaKnown RBP13.08□□□□□ -0.32
MSH5-216ENST00000484309 STIM1Q13586 685 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 PHLDB3Q6NSJ2 640 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 PJA1Q8NG27 643 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
MSH5-216ENST00000484309 SHDQ96IW2 340 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 CTNND2Q9UQB3 1225 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
MSH5-216ENST00000484309 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
MSH5-216ENST00000484309 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 PSMA7O14818 248 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 TRIM66O15016 1216 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 FAM163BP0C2L3 166 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 CCDC130P13994 396 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 GLULP15104 373 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 CD58P19256 250 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 CCNE1P24864 410 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 AVPR1AP37288 418 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 SOX9P48436 509 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 NDST1P52848 882 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 PRKCQQ04759 706 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 CAMK4Q16566 473 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 KRT39Q6A163 491 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 DENND5BQ6ZUT9 1274 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 FAM35AQ86V20 835 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
MSH5-216ENST00000484309 CCDC105Q8IYK2 499 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 DTWD2Q8NBA8 298 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 TAF4BQ92750 862 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 SEMA4DQ92854 862 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 DNASE1L2Q92874 299 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 IRF7Q92985 503 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 E2F7Q96AV8 911 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 TRMT2BQ96GJ1 504 aaKnown RBP13.07□□□□□ -0.32
MSH5-216ENST00000484309 TWNKQ96RR1 684 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 SLC22A12Q96S37 553 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 PRRX2Q99811 253 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 LTB4R2Q9NPC1 389 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
MSH5-216ENST00000484309 NDRG2Q9UN36 371 aaKnown RBP13.07□□□□□ -0.32
MSH5-216ENST00000484309 SIT1Q9Y3P8 196 aa13.07□□□□□ -0.32
MSH5-216ENST00000484309 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 C2orf78A6NCI8 922 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 SHISA7A6NL88 538 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 SLC16A3O15427 465 aaKnown RBP13.06□□□□□ -0.32
MSH5-216ENST00000484309 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
MSH5-216ENST00000484309 STX17P56962 302 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 UBE2HP62256 183 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
MSH5-216ENST00000484309 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 FCHO2Q0JRZ9 810 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 MORC3Q14149 939 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 PAQR9Q6ZVX9 377 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 MON1AQ86VX9 555 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 ZC3H3Q8IXZ2 948 aaKnown RBP13.06□□□□□ -0.32
MSH5-216ENST00000484309 RIN3Q8TB24 985 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 BPIFB1Q8TDL5 484 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 CSGALNACT1Q8TDX6 532 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 NELFBQ8WX92 580 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 ATOH1Q92858 354 aaPredicted RBP13.06□□□□□ -0.32
MSH5-216ENST00000484309 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms