RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RAB20Q9NX57 234 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 RBAKQ9NYW8 714 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 ADAMTS1Q9UHI8 967 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 CPSF3Q9UKF6 684 aaKnown RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 JRKLQ9Y4A0 524 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 STYXL1Q9Y6J8 313 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 DOCK8Q8NF50 2099 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 MYO10Q9HD67 2058 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 A0A087X0T9 212 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 A0A0U1RQJ8 604 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 LRRIQ3A6PVS8 624 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 C2CD4DB7Z1M9 353 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 NRG2O14511 850 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ZNF263O14978 683 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 SPTLC1O15269 473 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 OGTO15294 1046 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CLSTN1O94985 981 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 FAM228BP0C875 321 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 KCNE1P15382 129 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 TNFAIP3P21580 790 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 NTHL1P78549 312 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CBX2Q14781 532 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 USP41Q3LFD5 358 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 PDE12Q6L8Q7 609 aaKnown RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ALKBH5Q6P6C2 394 aaKnown RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 GJB7Q6PEY0 223 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ZNF571Q7Z3V5 609 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ADHFE1Q8IWW8 467 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 PPM1KQ8N3J5 372 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ATRIPQ8WXE1 791 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 SUSD6Q92537 303 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 GOLGA1Q92805 767 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CASP10Q92851 521 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ELMO3Q96BJ8 720 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 TMEM209Q96SK2 561 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CDCA3Q99618 268 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 TTPALQ9BTX7 342 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CARD6Q9BX69 1037 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 EMILIN2Q9BXX0 1053 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 IMPG2Q9BZV3 1241 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 LACRTQ9GZZ8 138 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 RPF1Q9H9Y2 349 aaKnown RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 C11orf16Q9NQ32 467 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 ARGLU1Q9NWB6 273 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-216ENST00000484087 TRIM10Q9UDY6 481 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 INTUQ9ULD6 942 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 COQ4Q9Y3A0 265 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 IRAK3Q9Y616 596 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 SAR1BQ9Y6B6 198 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CDY1Q9Y6F8 540 aa7.38□□□□□ -1.23
BRCA1-216ENST00000484087 CTAGE15A4D2H0 777 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 BTNL10A8MVZ5 291 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 LCE2BO14633 110 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 HCRTO43612 131 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 NCK2O43639 380 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 PHACTR2O75167 634 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 LRRN2O75325 713 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 GLUD1P00367 558 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 ASGR2P07307 311 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 ADH1AP07327 375 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CLTAP09496 248 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 H2AFZP0C0S5 128 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CTAGE8P0CG41 777 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 OR1D2P34982 312 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 USP8P40818 1118 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 NOP2P46087 812 aaKnown RBP7.37□□□□□ -1.23
BRCA1-216ENST00000484087 BIRC3Q13489 604 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CCDC142Q17RM4 750 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 C1orf220Q5T0J3 134 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 TMEM184AQ6ZMB5 413 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 H2AFVQ71UI9 128 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 SV2AQ7L0J3 742 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 APBB1IPQ7Z5R6 666 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CTAGE6Q86UF2 777 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CTAGE4Q8IX94 777 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 LMO3Q8TAP4 145 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 RSPH1Q8WYR4 309 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
BRCA1-216ENST00000484087 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 ADAM7Q9H2U9 754 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 RXFP1Q9HBX9 757 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 SEPT11Q9NVA2 429 aaKnown RBP7.37□□□□□ -1.23
BRCA1-216ENST00000484087 HCFC1R1Q9NWW0 138 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 NAGPAQ9UK23 515 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 NUB1Q9Y5A7 615 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 MYO15AQ9UKN7 3530 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 DMDP11532 3685 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 USP34Q70CQ2 3546 aa7.37□□□□□ -1.23
BRCA1-216ENST00000484087 CCDC195A0A1B0GUA6 201 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 WDR27A2RRH5 827 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 RCCD1A6NED2 376 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TMEM189-UBE2V1I3L0A0 370 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CCL16O15467 120 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SOAT2O75908 522 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 MOCS3O95396 460 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ABL1P00519 1130 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SRGAP2BP0DMP2 458 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PRLRP16471 622 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TCP1P17987 556 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms