RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 MFSD6LQ8IWD5 586 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 TTC16Q8NEE8 873 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 DEPDC1BQ8WUY9 529 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 MRPS31Q92665 395 aaKnown RBP17.64■□□□□ 0.41
VAMP4-204ENST00000482519 IRF7Q92985 503 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 B3GNT5Q9BYG0 378 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 ZNF518BQ9C0D4 1074 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 TMEM8AQ9HCN3 771 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 TRPC7Q9HCX4 862 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 UXTQ9UBK9 157 aaPredicted RBP17.64■□□□□ 0.41
VAMP4-204ENST00000482519 NCANO14594 1321 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 F8VP50 259 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 H0Y858 1186 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 TRIM66O15016 1216 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 GALR2O43603 387 aaPredicted RBP17.63■□□□□ 0.41
VAMP4-204ENST00000482519 STX10O60499 249 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 CD44P16070 742 aaKnown RBP17.63■□□□□ 0.41
VAMP4-204ENST00000482519 ASPAP45381 313 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 STARD6P59095 220 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 NOP14P78316 857 aaKnown RBP17.63■□□□□ 0.41
VAMP4-204ENST00000482519 PRKCQQ04759 706 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 LRRC63Q05C16 580 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 ENPEPQ07075 957 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 TCF15Q12870 199 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 KRT39Q6A163 491 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 PHLDB3Q6NSJ2 640 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 CMTM8Q8IZV2 173 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 TRMT2BQ96GJ1 504 aaKnown RBP17.63■□□□□ 0.41
VAMP4-204ENST00000482519 DHTKD1Q96HY7 919 aaPredicted RBP17.63■□□□□ 0.41
VAMP4-204ENST00000482519 TNIP3Q96KP6 325 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 ELOVL4Q9GZR5 314 aa17.63■□□□□ 0.41
VAMP4-204ENST00000482519 ZNF638Q14966 1978 aaKnown RBP17.62■□□□□ 0.41
VAMP4-204ENST00000482519 KANSL1LA0AUZ9 987 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 SLC16A3O15427 465 aaKnown RBP17.62■□□□□ 0.41
VAMP4-204ENST00000482519 LRRN2O75325 713 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 CD58P19256 250 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 CCNE1P24864 410 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 GTF2H1P32780 548 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 MXI1P50539 228 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 NDST1P52848 882 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 CACNA2D1P54289 1103 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 NHLH1Q02575 133 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 IFRD2Q12894 506 aaPredicted RBP17.62■□□□□ 0.41
VAMP4-204ENST00000482519 DENND5BQ6ZUT9 1274 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 DTWD2Q8NBA8 298 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 TTC8Q8TAM2 541 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 CSGALNACT1Q8TDX6 532 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 NELFBQ8WX92 580 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 DNASE1L2Q92874 299 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 ZFYVE19Q96K21 471 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 SPATA17Q96L03 361 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 MYRFLQ96LU7 910 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 LRRC3BQ96PB8 259 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 APOBEC3GQ9HC16 384 aaKnown RBP17.62■□□□□ 0.41
VAMP4-204ENST00000482519 HMGXB4Q9UGU5 601 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 MTF2Q9Y483 593 aaPredicted RBP17.62■□□□□ 0.41
VAMP4-204ENST00000482519 ATP8B3O60423 1300 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 NUP210Q8TEM1 1887 aaPredicted RBP17.62■□□□□ 0.41
VAMP4-204ENST00000482519 PTPRDP23468 1912 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 DENND4CQ5VZ89 1909 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 TICRRQ7Z2Z1 1910 aa17.62■□□□□ 0.41
VAMP4-204ENST00000482519 OBSL1O75147 1896 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 FAM170BA6NMN3 283 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 BMP6P22004 513 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 DDX6P26196 483 aaKnown RBP eCLIP17.61■□□□□ 0.41
VAMP4-204ENST00000482519 PPP1R2P41236 205 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 NUBP1P53384 320 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 USP46P62068 366 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 MORC3Q14149 939 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 ZNF852Q6ZMS4 543 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 MON1AQ86VX9 555 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 CELF5Q8N6W0 485 aaKnown RBP17.61■□□□□ 0.41
VAMP4-204ENST00000482519 PJA1Q8NG27 643 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 BPIFB1Q8TDL5 484 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 SEMA4DQ92854 862 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 ATOH1Q92858 354 aaPredicted RBP17.61■□□□□ 0.41
VAMP4-204ENST00000482519 C8orf48Q96LL4 319 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 CYP2S1Q96SQ9 504 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 NIF3L1Q9GZT8 377 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 ARMCX3Q9UH62 379 aaPredicted RBP17.61■□□□□ 0.41
VAMP4-204ENST00000482519 ZMYM5Q9UJ78 669 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 CTNND2Q9UQB3 1225 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 CCL26Q9Y258 94 aa17.61■□□□□ 0.41
VAMP4-204ENST00000482519 PPP1R3GB7ZBB8 358 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 TADA3O75528 432 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 ABL1P00519 1130 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 CCDC130P13994 396 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 TRIM21P19474 475 aaKnown RBP17.6■□□□□ 0.41
VAMP4-204ENST00000482519 KPNA1P52294 538 aaPredicted RBP17.6■□□□□ 0.41
VAMP4-204ENST00000482519 STX17P56962 302 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 FCHO2Q0JRZ9 810 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 CCDC40Q4G0X9 1142 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 WDR44Q5JSH3 913 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 FAM35AQ86V20 835 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 CCDC105Q8IYK2 499 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 FBXL13Q8NEE6 735 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 USP13Q92995 863 aaPredicted RBP17.6■□□□□ 0.41
VAMP4-204ENST00000482519 KCNK16Q96T55 309 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 DDX23Q9BUQ8 820 aaKnown RBP17.6■□□□□ 0.41
VAMP4-204ENST00000482519 BCO2Q9BYV7 579 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms